Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1935 XP_006718907 18 1935 XP_006718906 18 1935 XP_005271619 18 1935 XP_005271618 18 1935 NP_001138519 16 5631 NP_009197 16 5631 NP_003733 16 5631 XP_006712881 16 5631 XP_006712880 16 5631 NP_061720 16 5631 NP_004534 16 7355 NP_005036 16 7355 NP_774959 16 7355 NP_001258137 16 7355 NP_001157980 16 7355 NP_001157979 16 7355 NP_940894 16 7355 NP_848599 16 7355 NP_071379 16 7355 NP_059830 16 7355 XP_005260849 16 7355 XP_006714051 16 7355 XP_006713081 16 7355 XP_005246674 16 7355 XP_005246673 16 7355 XP_005246672 16 7355 XP_005246670 16 7355 XP_005246669 16 7355 XP_005246668 16 7355 XP_005246667 16 7355 XP_005246665 16 7355 XP_006712605 16 7355 XP_006712604 16 7355 XP_005246663 16 7355 XP_005246660 16 7355 XP_005246661 16 7355 XP_005246659 16 7355 XP_005246658 16 7355 XP_005246657 16 7355 XP_005246656 16 7355 XP_005246655 16 7355 XP_005246654 16 7355 XP_005246653 16 7355 XP_005246652 16 7355 XP_005246649 16 7355 XP_005246651 16 7355 XP_005246650 16 7355 XP_005246648 16 7355 XP_005246647 16 7355 NP_005103 16 7355 NP_942093 16 7355 NP_001135771 15 9605 NP_003891 15 9605 NP_001135770 15 9605 NP_002706 15 9605 NP_001009552 15 9605 NP_060689 15 9605>NP_000042 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMDTVKYSS 9 IMDTVK SS Sbjct: 124 IMDTVKDSS 132>XP_006718907 Length = 3050 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMDTVKYSS 9 IMDTVK SS Sbjct: 124 IMDTVKDSS 132>XP_006718906 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMDTVKYSS 9 IMDTVK SS Sbjct: 124 IMDTVKDSS 132>XP_005271619 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMDTVKYSS 9 IMDTVK SS Sbjct: 124 IMDTVKDSS 132>XP_005271618 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMDTVKYSS 9 IMDTVK SS Sbjct: 124 IMDTVKDSS 132>NP_001138519 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IMDTVKY 7 I DTVKY Sbjct: 58 IRDTVKY 64>NP_009197 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IMDTVKY 7 I DTVKY Sbjct: 84 IRDTVKY 90>NP_003733 Length = 1321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IMDTVKY 7 IMD +KY Sbjct: 1170 IMDNIKY 1176>XP_006712881 Length = 1335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IMDTVKY 7 IMD +KY Sbjct: 1184 IMDNIKY 1190>XP_006712880 Length = 1335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IMDTVKY 7 IMD +KY Sbjct: 1184 IMDNIKY 1190>NP_061720 Length = 4024 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MDTVKYSS 9 +DT++YS+ Sbjct: 1953 LDTIRYSA 1960>NP_004534 Length = 6669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>NP_005036 Length = 3460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MDTVKYSS 9 +DT+ YSS Sbjct: 509 LDTLSYSS 516>NP_774959 Length = 3458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MDTVKYSS 9 +DT+ YSS Sbjct: 509 LDTLSYSS 516>NP_001258137 Length = 8560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>NP_001157980 Length = 8525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>NP_001157979 Length = 8525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>NP_940894 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MDTVKYS 8 MDT +YS Sbjct: 1 MDTTRYS 7>NP_848599 Length = 3092 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDTVKYS 8 MDT++Y+ Sbjct: 1869 MDTIRYT 1875>NP_071379 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MDTVKY 7 +DTVKY Sbjct: 604 LDTVKY 609>NP_059830 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DTV+Y+S Sbjct: 386 DTVRYTS 392>XP_005260849 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MDTVKY 7 +DTVKY Sbjct: 415 LDTVKY 420>XP_006714051 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DTV+Y+S Sbjct: 260 DTVRYTS 266>XP_006713081 Length = 3964 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDTVKYS 8 MDT++Y+ Sbjct: 1892 MDTIRYT 1898>XP_005246674 Length = 7553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246673 Length = 8018 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246672 Length = 8277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246670 Length = 8282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246669 Length = 8282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246668 Length = 8308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246667 Length = 8308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246665 Length = 8339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_006712605 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_006712604 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246663 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246660 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246661 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246659 Length = 8401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246658 Length = 8401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246657 Length = 8432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246656 Length = 8432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246655 Length = 8463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246654 Length = 8463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246653 Length = 8463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246652 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246649 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246651 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246650 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246648 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>XP_005246647 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DT+KYS+ Sbjct: 1965 DTLKYST 1971>NP_005103 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTVKYSS 9 DTV+Y+S Sbjct: 246 DTVRYTS 252>NP_942093 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MDTVKY 7 +DTVKY Sbjct: 604 LDTVKY 609>NP_001135771 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDTVKYS 8 +DT++YS Sbjct: 344 LDTIQYS 350>NP_003891 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDTVKYS 8 +DT++YS Sbjct: 428 LDTIQYS 434>NP_001135770 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDTVKYS 8 +DT++YS Sbjct: 344 LDTIQYS 350>NP_002706 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DTVKYS 8 DT+KYS Sbjct: 280 DTLKYS 285>NP_001009552 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DTVKYS 8 DT+KYS Sbjct: 280 DTLKYS 285>NP_060689 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKYSS 9 T+KYSS Sbjct: 702 TIKYSS 707Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.121 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 483,745 Number of extensions: 886 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |