Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 509 NP_001120972 20 509 XP_006716052 20 509 XP_006716051 20 509 NP_891550 18 1935 XP_005265386 18 1935 NP_619639 17 4312 NP_037472 17 4312 XP_005270452 17 4312 NP_006836 17 4312 NP_071935 16 5631 NP_001128206 16 5631 NP_001127945 16 7355 NP_002110 16 7355 NP_001265113 16 7355 NP_055430 16 7355 NP_005119 16 7355 XP_006726149 16 7355 XP_005275597 16 7355 XP_006726059 16 7355 XP_005275440 16 7355 XP_006725969 16 7355 XP_005275300 16 7355 XP_006725878 16 7355 XP_005275163 16 7355 XP_006725760 16 7355 XP_005275008 16 7355 XP_006725546 16 7355 XP_005272861 16 7355 XP_006724131 16 7355 XP_005255922 16 7355 XP_006721236 16 7355 XP_006721235 16 7355 XP_005255921 16 7355 XP_005255920 16 7355 XP_005255919 16 7355 XP_005255918 16 7355 XP_005255917 16 7355 XP_005255916 16 7355 XP_006715139 16 7355 XP_005249104 16 7355 NP_001028728 15 9605 NP_002697 15 9605 NP_001028729 15 9605 NP_808907 15 9605 NP_005145 15 9605 NP_001122082 15 9605 NP_001269978 15 9605 NP_001153059 15 9605 NP_001153060 15 9605 NP_598000 15 9605 NP_003927 15 9605 NP_808821 15 9605 NP_808820 15 9605 NP_066277 15 9605 NP_060466 15 9605 NP_001137546 15 9605 NP_919278 15 9605 XP_006720825 15 9605 XP_006720824 15 9605 XP_006720243 15 9605 XP_006720242 15 9605 XP_005267838 15 9605 XP_005267837 15 9605 XP_005267836 15 9605 XP_005267834 15 9605 XP_005267835 15 9605 XP_005248716 15 9605 XP_006712459 15 9605 NP_443085 15 9605 NP_066283 15 9605>NP_000236 Length = 1390 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LVQRSNGE 9 LVQRSNGE Sbjct: 18 LVQRSNGE 25>NP_001120972 Length = 1408 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LVQRSNGE 9 LVQRSNGE Sbjct: 18 LVQRSNGE 25>XP_006716052 Length = 1409 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LVQRSNGE 9 LVQRSNGE Sbjct: 37 LVQRSNGE 44>XP_006716051 Length = 1427 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LVQRSNGE 9 LVQRSNGE Sbjct: 37 LVQRSNGE 44>NP_891550 Length = 1935 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 ++ QRSNGE Sbjct: 1407 VVCQRSNGE 1415>XP_005265386 Length = 1907 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 ++ QRSNGE Sbjct: 1379 VVCQRSNGE 1387>NP_619639 Length = 4074 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 ILVQ S+GE Sbjct: 3745 ILVQPSDGE 3753>NP_037472 Length = 818 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VQRSNGE 9 VQR NGE Sbjct: 618 VQRQNGE 624>XP_005270452 Length = 684 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 I +QRSNG Sbjct: 17 IKIQRSNG 24>NP_006836 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 I +QRSNG Sbjct: 17 IKIQRSNG 24>NP_071935 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +LVQ SNG+ Sbjct: 24 VLVQFSNGK 32>NP_001128206 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 ILV+ S+GE Sbjct: 135 ILVEESSGE 143>NP_001127945 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 382 LLIQRTNEE 390>NP_002110 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>NP_001265113 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 413 LLIQRTNEE 421>NP_055430 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 486 LLIQRTNEE 494>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +LVQR+N E Sbjct: 240 VLVQRNNLE 248>XP_006726149 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005275597 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>XP_006726059 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005275440 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>XP_006725969 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005275300 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>XP_006725878 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005275163 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>XP_006725760 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005275008 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>XP_006725546 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005272861 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +LVQR+N E Sbjct: 240 VLVQRNNLE 248>XP_005255922 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 423 LLIQRTNEE 431>XP_006721236 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 483 LLIQRTNEE 491>XP_006721235 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 483 LLIQRTNEE 491>XP_005255921 Length = 1227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 496 LLIQRTNEE 504>XP_005255920 Length = 1229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 498 LLIQRTNEE 506>XP_005255919 Length = 1860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 1291 LLIQRTNEE 1299>XP_005255918 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 1218 LLIQRTNEE 1226>XP_005255917 Length = 1984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 1291 LLIQRTNEE 1299>XP_005255916 Length = 2022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILVQRSNGE 9 +L+QR+N E Sbjct: 1291 LLIQRTNEE 1299>XP_006715139 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 68 ILVERSN 74>XP_005249104 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILVQRSN 7 ILV+RSN Sbjct: 98 ILVERSN 104>NP_001028728 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 187 VMIQRVNG 194>NP_002697 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 187 VMIQRVNG 194>NP_001028729 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 187 VMIQRVNG 194>NP_808907 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 187 VMIQRVNG 194>NP_005145 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 165 QKSNGE 170>NP_001122082 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 165 QKSNGE 170>NP_001269978 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 88 QKSNGE 93>NP_001153059 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 1021 QKSNGE 1026>NP_001153060 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 944 QKSNGE 949>NP_598000 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 1021 QKSNGE 1026>NP_003927 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILVQRSNGE 9 ++VQ S GE Sbjct: 177 VIVQASTGE 185>NP_808821 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 255 VMIQRVNG 262>NP_808820 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>NP_066277 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVQRSNGE 9 L+QRS+G+ Sbjct: 64 LLQRSHGD 71>NP_060466 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILVQRSNGE 9 I VQR+N E Sbjct: 541 ISVQRTNAE 549>NP_001137546 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILVQRSNGE 9 I VQR+N E Sbjct: 530 ISVQRTNAE 538>NP_919278 Length = 1925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILVQRSNGE 9 ILV+ S GE Sbjct: 1871 ILVEASRGE 1879>XP_006720825 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 165 QKSNGE 170>XP_006720824 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 165 QKSNGE 170>XP_006720243 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_006720242 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_005267838 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_005267837 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_005267836 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_005267834 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_005267835 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189>XP_005248716 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QRSNGE 9 Q+SNGE Sbjct: 1021 QKSNGE 1026>XP_006712459 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILVQRSNGE 9 ILV+ S GE Sbjct: 1860 ILVEASRGE 1868>NP_443085 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 ILVQ +NG Sbjct: 451 ILVQGANG 458>NP_066283 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILVQRSNG 8 +++QR NG Sbjct: 182 VMIQRVNG 189Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.133 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 550,137 Number of extensions: 748 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |