Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 19 869 XP_005251512 19 869 NP_009017 18 1482 XP_006720075 18 1482 NP_116295 17 2528 NP_149106 17 3301 XP_006726589 17 3301 XP_006718462 17 3301 XP_006710010 17 3301 NP_443182 16 5631 XP_006719827 16 5631 NP_006351 16 7355 NP_757364 16 7355 NP_757363 16 7355 NP_757365 16 7355 NP_001185550 16 7355 NP_006540 16 7355 NP_001271236 16 7355 NP_001271235 16 7355 NP_071918 16 7355 NP_001257415 16 7355 NP_001257414 16 7355 NP_919269 16 7355 XP_005254649 16 7355 XP_005254648 16 7355 XP_005253880 16 7355 XP_005253879 16 7355 XP_005264966 16 7355 NP_001058 15 9605 NP_001182502 15 9605 NP_001258211 15 9605 NP_056417 15 9605 NP_001254507 15 9605 NP_085124 15 9605 NP_803187 15 9605 NP_005637 15 9605 NP_008832 15 9605 NP_001103132 15 9605 NP_001177962 15 9605 NP_001073996 15 9605 NP_065931 15 9605 NP_055468 15 9605 NP_001161713 15 9605 XP_006725355 15 9605 XP_006723257 15 9605 XP_006723256 15 9605 XP_005257689 15 9605 XP_006720603 15 9605 XP_006720602 15 9605 XP_006719767 15 9605 XP_006719766 15 9605 XP_006719765 15 9605 XP_006712602 15 9605 XP_006712014 15 9605 XP_005273291 15 9605 NP_002236 15 9605 NP_149420 15 9605 NP_001004750 15 9605>NP_004963 Length = 1132 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTRKPIRY 9 ILTRK IRY Sbjct: 223 ILTRKRIRY 231>XP_005251512 Length = 1132 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTRKPIRY 9 ILTRK IRY Sbjct: 223 ILTRKRIRY 231>NP_009017 Length = 1129 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRKPIRY 9 TRKP+RY Sbjct: 4 TRKPMRY 10>XP_006720075 Length = 1127 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRKPIRY 9 TRKP+RY Sbjct: 4 TRKPMRY 10>NP_116295 Length = 114 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTRKPIRY 9 L++KP+RY Sbjct: 62 LSKKPLRY 69>NP_149106 Length = 830 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP+RY Sbjct: 85 RKPVRY 90>XP_006726589 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILTRKPI 7 +LTRKP+ Sbjct: 276 VLTRKPV 282>XP_006718462 Length = 4966 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILTRKPI 7 +LTRKP+ Sbjct: 4301 VLTRKPV 4307>XP_006710010 Length = 1103 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILTRKPI 7 +LTRKP+ Sbjct: 497 VLTRKPV 503>NP_443182 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTRKPI 7 LTRKPI Sbjct: 10 LTRKPI 15>XP_006719827 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTRKPI 7 LTRKPI Sbjct: 10 LTRKPI 15>NP_006351 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ILTRKPIRY 9 +LT KP+++ Sbjct: 223 LLTLKPVKF 231>NP_757364 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 473 LLTKKPTR 480>NP_757363 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 516 LLTKKPTR 523>NP_757365 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 473 LLTKKPTR 480>NP_001185550 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 677 RRPVRY 682>NP_006540 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 516 LLTKKPTR 523>NP_001271236 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT KP+R Sbjct: 604 VLTVKPVR 611>NP_001271235 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT KP+R Sbjct: 561 VLTVKPVR 568>NP_071918 Length = 1883 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT KP+R Sbjct: 1376 VLTVKPVR 1383>NP_001257415 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 516 LLTKKPTR 523>NP_001257414 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 516 LLTKKPTR 523>NP_919269 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 677 RRPVRY 682>XP_005254649 Length = 1819 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT KP+R Sbjct: 1312 VLTVKPVR 1319>XP_005254648 Length = 1906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT KP+R Sbjct: 1399 VLTVKPVR 1406>XP_005253880 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 516 LLTKKPTR 523>XP_005253879 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILTRKPIR 8 +LT+KP R Sbjct: 473 LLTKKPTR 480>XP_005264966 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 677 RRPVRY 682>NP_001058 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ILTRKPIRY 9 + +KPI+Y Sbjct: 1513 VRAKKPIKY 1521>NP_001182502 Length = 1829 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ILTRKPI 7 ILT KPI Sbjct: 804 ILTAKPI 810>NP_001258211 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ILTRKPI 7 ILT KPI Sbjct: 804 ILTAKPI 810>NP_056417 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LTRKPIRY 9 L R P+RY Sbjct: 193 LRRPPLRY 200>NP_001254507 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LTRKPIRY 9 L R P+RY Sbjct: 194 LRRPPLRY 201>NP_085124 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ILTRKPI 7 ILT KPI Sbjct: 804 ILTAKPI 810>NP_803187 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ILTRKPI 7 ILT KPI Sbjct: 804 ILTAKPI 810>NP_005637 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTRKPIRY 9 LTRK RY Sbjct: 279 LTRKRARY 286>NP_008832 Length = 2548 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTRKPIR 8 +T+KP+R Sbjct: 367 ITKKPLR 373>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ILTRKPIRY 9 ILT PI Y Sbjct: 3974 ILTPSPITY 3982>NP_001177962 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 20 REPVRY 25>NP_001073996 Length = 2116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 991 RRPLRY 996>NP_065931 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP++Y Sbjct: 208 RKPLKY 213>NP_055468 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP+R+ Sbjct: 14 RKPVRF 19>NP_001161713 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 97 REPVRY 102>XP_006725355 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 8 RRPLRY 13>XP_006723257 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP++Y Sbjct: 208 RKPLKY 213>XP_006723256 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP++Y Sbjct: 208 RKPLKY 213>XP_005257689 Length = 1519 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ILTRKPIRY 9 + +KPI+Y Sbjct: 1501 VRAKKPIKY 1509>XP_006720603 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTRKPIR 8 +T+KP+R Sbjct: 367 ITKKPLR 373>XP_006720602 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTRKPIR 8 +T+KP+R Sbjct: 367 ITKKPLR 373>XP_006719767 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP+R+ Sbjct: 14 RKPVRF 19>XP_006719766 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP+R+ Sbjct: 14 RKPVRF 19>XP_006719765 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 RKP+R+ Sbjct: 14 RKPVRF 19>XP_006712602 Length = 2142 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 991 RRPLRY 996>XP_006712014 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RKPIRY 9 R+P+RY Sbjct: 97 REPVRY 102>XP_005273291 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTRKPIRY 9 LTRK RY Sbjct: 279 LTRKRARY 286>NP_002236 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTRKPIRY 9 +TR+P+ Y Sbjct: 160 VTRRPVLY 167>NP_149420 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ILTRKPIRY 9 I R P+RY Sbjct: 122 IAIRNPLRY 130>NP_001004750 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ILTRKPIRY 9 I R P+RY Sbjct: 122 ITIRSPLRY 130Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.154 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 649,124 Number of extensions: 1043 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |