Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_001263627 18 1135 NP_001263628 18 1135 NP_001263626 18 1135 NP_000224 16 5631 NP_000360 16 5631 XP_005268094 16 5631 XP_005264366 16 5631 XP_006712078 16 5631 NP_001268639 15 9605 NP_001268640 15 9605 NP_001186308 15 9605 NP_056156 15 9605 NP_062873 15 9605 NP_001186307 15 9605 NP_004696 15 9605 NP_062874 15 9605 NP_001003811 15 9605 NP_001268641 15 9605 NP_004184 15 9605 XP_006718114 15 9605 XP_005270318 15 9605 XP_006718113 15 9605 XP_006718112 15 9605 XP_006718111 15 9605 XP_006718110 15 9605 XP_006712451 15 9605 XP_005263965 15 9605 XP_005263964 15 9605 NP_000863 15 9605 NP_112566 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 251 ILTIITLED 259>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 212 ILTIITLED 220>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 251 ILTIITLED 259>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 251 ILTIITLED 259>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 212 ILTIITLED 220>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 212 ILTIITLED 220>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 212 ILTIITLED 220>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 251 ILTIITLED 259>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 212 ILTIITLED 220>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 119 ILTIITLED 127>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 119 ILTIITLED 127>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 119 ILTIITLED 127>NP_001263627 Length = 182 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 92 ILTIITLED 100>NP_001263628 Length = 187 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 92 ILTIITLED 100>NP_001263626 Length = 234 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILTIITLEN 9 ILTIITLE+ Sbjct: 92 ILTIITLED 100>NP_000224 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 457 LTVITLE 463>NP_000360 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005268094 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005264366 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 138 LTVITLE 144>XP_006712078 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTIITLE 8 LT+ITLE Sbjct: 147 LTVITLE 153>NP_001268639 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 481 ILTKSTLEN 489>NP_001268640 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 468 ILTKSTLEN 476>NP_001186308 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 502 LMEIITVEN 510>NP_056156 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 492 ILTKSTLEN 500>NP_062873 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILTIITL 7 ILT+ITL Sbjct: 87 ILTLITL 93>NP_001186307 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 503 LMEIITVEN 511>NP_004696 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 I+TI+ L+N Sbjct: 480 IVTIVVLKN 488>NP_062874 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILTIITL 7 ILT+ITL Sbjct: 87 ILTLITL 93>NP_001003811 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IITLEN 9 IITLEN Sbjct: 514 IITLEN 519>NP_001268641 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 356 ILTKSTLEN 364>NP_004184 Length = 1859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 502 LMEIITVEN 510>XP_006718114 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 536 LMEIITVEN 544>XP_005270318 Length = 1860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 503 LMEIITVEN 511>XP_006718113 Length = 1881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 536 LMEIITVEN 544>XP_006718112 Length = 1889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 536 LMEIITVEN 544>XP_006718111 Length = 1892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 535 LMEIITVEN 543>XP_006718110 Length = 1893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILTIITLEN 9 ++ IIT+EN Sbjct: 536 LMEIITVEN 544>XP_006712451 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 492 ILTKSTLEN 500>XP_005263965 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 492 ILTKSTLEN 500>XP_005263964 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILTIITLEN 9 ILT TLEN Sbjct: 489 ILTKSTLEN 497>NP_000863 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILTIITL 7 ILT+ITL Sbjct: 87 ILTLITL 93>NP_112566 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IITLEN 9 IITLEN Sbjct: 499 IITLEN 504Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.147 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,664 Number of extensions: 791 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |