Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 869 NP_000069 17 2528 NP_001273014 17 2528 XP_006721187 17 2528 NP_005678 16 5631 XP_006712233 16 5631 XP_006712232 16 5631 XP_006712231 16 5631 NP_733751 16 7355 NP_079092 16 7355 NP_001793 16 7355 NP_061124 16 7355 XP_005276559 16 7355 XP_005253478 16 7355 XP_006716142 16 7355 XP_005250088 16 7355 XP_006716141 16 7355 XP_005250085 16 7355 XP_006716140 16 7355 XP_005250084 16 7355 XP_005250083 16 7355 XP_005250082 16 7355 NP_775797 15 9605 NP_001276018 15 9605 NP_079048 15 9605 NP_001276019 15 9605 NP_001276017 15 9605 NP_001276020 15 9605 NP_057506 15 9605 XP_006721915 15 9605 XP_006720124 15 9605 XP_005267429 15 9605 XP_006720123 15 9605 XP_005271279 15 9605 XP_005271277 15 9605 XP_005271276 15 9605 XP_005271275 15 9605 XP_005271273 15 9605 NP_055418 15 9605>NP_002430 Length = 1137 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 ILNEQ AKV Sbjct: 688 ILNEQAAKV 696>NP_000069 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN +TAKV Sbjct: 39 VLNHETAKV 47>NP_001273014 Length = 433 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN +TAKV Sbjct: 39 VLNHETAKV 47>XP_006721187 Length = 266 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN +TAKV Sbjct: 39 VLNHETAKV 47>NP_005678 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 I+ E+TAK+ Sbjct: 109 IITEETAKI 117>XP_006712233 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 I+ E+TAK+ Sbjct: 10 IITEETAKI 18>XP_006712232 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 I+ E+TAK+ Sbjct: 10 IITEETAKI 18>XP_006712231 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 I+ E+TAK+ Sbjct: 10 IITEETAKI 18>NP_733751 Length = 4911 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 1989 VVSEQTAK 1996>NP_079092 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +L+EQ AKV Sbjct: 503 LLSEQRAKV 511>NP_001793 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 +NEQ AKV Sbjct: 76 MNEQHAKV 83>NP_061124 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 LN+QTA V Sbjct: 84 LNQQTAPV 91>XP_005276559 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 +NEQ AKV Sbjct: 76 MNEQHAKV 83>XP_005253478 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 LN+QTA V Sbjct: 84 LNQQTAPV 91>XP_006716142 Length = 4927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>XP_005250088 Length = 4928 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>XP_006716141 Length = 4959 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>XP_005250085 Length = 4979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>XP_006716140 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>XP_005250084 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>XP_005250083 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2005 VVSEQTAK 2012>XP_005250082 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILNEQTAK 8 +++EQTAK Sbjct: 2006 VVSEQTAK 2013>NP_775797 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN++ AKV Sbjct: 173 LLNQEKAKV 181>NP_001276018 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 986 LNETTAK 992>NP_079048 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 1005 LNETTAK 1011>NP_001276019 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 1005 LNETTAK 1011>NP_001276017 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 1005 LNETTAK 1011>NP_001276020 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 645 LNETTAK 651>NP_057506 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 LN+ TAKV Sbjct: 45 LNDVTAKV 52>XP_006721915 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 +NEQ AKV Sbjct: 76 VNEQHAKV 83>XP_006720124 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN++ AKV Sbjct: 87 LLNQEKAKV 95>XP_005267429 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN++ AKV Sbjct: 173 LLNQEKAKV 181>XP_006720123 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILNEQTAKV 9 +LN++ AKV Sbjct: 173 LLNQEKAKV 181>XP_005271279 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 645 LNETTAK 651>XP_005271277 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 814 LNETTAK 820>XP_005271276 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 930 LNETTAK 936>XP_005271275 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 930 LNETTAK 936>XP_005271273 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNEQTAK 8 LNE TAK Sbjct: 993 LNETTAK 999>NP_055418 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNEQTAKV 9 +NEQ AKV Sbjct: 76 VNEQHAKV 83Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.121 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 341,440 Number of extensions: 287 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |