Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060142 17 3301 NP_060527 17 3301 NP_877499 17 3301 XP_006720645 17 3301 XP_005254546 17 3301 XP_005254545 17 3301 XP_005254544 17 3301 XP_005254543 17 3301 XP_005246213 17 3301 XP_006711941 17 3301 XP_006711940 17 3301 XP_006711939 17 3301 NP_036476 17 3301 NP_001030014 17 3301 NP_000876 17 4312 NP_001010898 17 4312 NP_783165 17 4312 XP_006710706 17 4312 NP_057264 16 5631 NP_003728 16 5631 NP_001012527 16 5631 NP_002410 16 5631 XP_005253264 16 5631 XP_005248368 16 5631 NP_001167630 16 7355 NP_071354 16 7355 NP_001167631 16 7355 NP_001230097 16 7355 NP_631900 16 7355 NP_777377 16 7355 NP_057594 16 7355 NP_001230098 16 7355 NP_001230099 16 7355 XP_005259737 16 7355 XP_006716441 16 7355 NP_612153 16 7355 NP_001161870 15 9605 NP_001120916 15 9605 NP_001001547 15 9605 NP_000063 15 9605 NP_006407 15 9605 NP_001001548 15 9605 NP_001120915 15 9605 NP_001276838 15 9605 NP_001276837 15 9605 NP_004922 15 9605 NP_001276840 15 9605 NP_757362 15 9605 NP_742099 15 9605 NP_647479 15 9605 NP_758963 15 9605 NP_057062 15 9605 NP_056222 15 9605 NP_001269596 15 9605 NP_001269595 15 9605 NP_001106279 15 9605 NP_001186256 15 9605 NP_003096 15 9605 XP_006726853 15 9605 XP_006723596 15 9605 XP_005253308 15 9605 XP_005250772 15 9605 XP_005250771 15 9605 XP_005250770 15 9605 XP_005244926 15 9605 NP_001956 15 9605 NP_001138526 15 9605>NP_060142 Length = 1865 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ++LLS GVP Sbjct: 1009 LVLLSFGVP 1017>NP_060527 Length = 289 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ILL+ IG+P Sbjct: 105 ILLMVIGIP 113>NP_877499 Length = 730 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ILL+ IG+P Sbjct: 105 ILLMVIGIP 113>XP_006720645 Length = 1060 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ++LLS GVP Sbjct: 1009 LVLLSFGVP 1017>XP_005254546 Length = 1443 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ++LLS GVP Sbjct: 567 LVLLSFGVP 575>XP_005254545 Length = 1864 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ++LLS GVP Sbjct: 1009 LVLLSFGVP 1017>XP_005254544 Length = 1884 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ++LLS GVP Sbjct: 1009 LVLLSFGVP 1017>XP_005254543 Length = 1885 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 ++LLS GVP Sbjct: 1009 LVLLSFGVP 1017>XP_005246213 Length = 250 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 80 LLLLLVGVP 88>XP_006711941 Length = 294 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 80 LLLLLVGVP 88>XP_006711940 Length = 319 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 80 LLLLLVGVP 88>XP_006711939 Length = 322 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 80 LLLLLVGVP 88>NP_036476 Length = 410 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 80 LLLLLVGVP 88>NP_001030014 Length = 767 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 LLL IGVP Sbjct: 432 LLLHIGVP 439>NP_000876 Length = 1032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 21 MLLLCLGVP 29>NP_001010898 Length = 727 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LL+ IG+P Sbjct: 104 VLLIIIGIP 112>NP_783165 Length = 576 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +GVP Sbjct: 21 LLLLLLGVP 29>XP_006710706 Length = 727 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LL+ IG+P Sbjct: 104 VLLIIIGIP 112>NP_057264 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLLSIGVP 9 +LLS+G+P Sbjct: 59 VLLSVGLP 66>NP_003728 Length = 3298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILLLSIGVP 9 +LLL GVP Sbjct: 30 LLLLGAGVP 38>NP_001012527 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLLSIGVP 9 +LLS+G+P Sbjct: 59 VLLSVGLP 66>NP_002410 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 LLL +G+P Sbjct: 712 LLLDLGIP 719>XP_005253264 Length = 3443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILLLSIGVP 9 +LLL GVP Sbjct: 175 LLLLGAGVP 183>XP_005248368 Length = 243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLLSIGVP 9 +LLS+G+P Sbjct: 59 VLLSVGLP 66>NP_001167630 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 LLLS G+P Sbjct: 360 LLLSTGMP 367>NP_071354 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 LLLS G+P Sbjct: 360 LLLSTGMP 367>NP_001167631 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 LLLS G+P Sbjct: 315 LLLSTGMP 322>NP_001230097 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL++G P Sbjct: 7 LLLLALGCP 15>NP_631900 Length = 120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLLSIGVP 9 LLL++G+P Sbjct: 8 LLLALGLP 15>NP_777377 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLLSIGVP 9 LLL++G+P Sbjct: 8 LLLALGLP 15>NP_057594 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 +LLS GVP Sbjct: 407 VLLSYGVP 414>NP_001230098 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL++G P Sbjct: 7 LLLLALGCP 15>NP_001230099 Length = 174 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL++G P Sbjct: 7 LLLLALGCP 15>XP_005259737 Length = 120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLLSIGVP 9 LLL++G+P Sbjct: 8 LLLALGLP 15>XP_006716441 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 LLLS G+P Sbjct: 333 LLLSTGMP 340>NP_612153 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL++G P Sbjct: 7 LLLLALGCP 15>NP_001161870 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLLSIGV 8 LLLS+G+ Sbjct: 56 LLLSVGI 62>NP_001120916 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>NP_001001547 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>NP_000063 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>NP_006407 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLLSIGV 8 LLLS+G+ Sbjct: 56 LLLSVGI 62>NP_001001548 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>NP_001120915 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>NP_001276838 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 386 MILLSVGV 393>NP_001276837 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 407 MILLSVGV 414>NP_004922 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 +LL+S+GV Sbjct: 182 VLLVSLGV 189>NP_001276840 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 370 MILLSVGV 377>NP_757362 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 +LL+S+GV Sbjct: 182 VLLVSLGV 189>NP_742099 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 +LL+S+GV Sbjct: 182 VLLVSLGV 189>NP_647479 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LLLSIGVP 9 L LSIG P Sbjct: 392 LALSIGTP 399>NP_758963 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LLLSIGVP 9 L LSIG P Sbjct: 392 LALSIGTP 399>NP_057062 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILLLSIGVP 9 ILLL G+P Sbjct: 445 ILLLRAGLP 453>NP_056222 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILLLSIGVP 9 +LLL +G+P Sbjct: 45 MLLLYVGLP 53>NP_001269596 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSIGVP 9 LLS+G+P Sbjct: 913 LLSLGLP 919>NP_001269595 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSIGVP 9 LLS+G+P Sbjct: 934 LLSLGLP 940>NP_001106279 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILLLSIGVP 9 ILLL G+P Sbjct: 559 ILLLRAGLP 567>NP_001186256 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILLLSIGVP 9 ILLL G+P Sbjct: 559 ILLLRAGLP 567>NP_003096 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 2146 LILLSLGV 2153>XP_006726853 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSIGVP 9 LLS+G+P Sbjct: 75 LLSLGLP 81>XP_006723596 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSIGVP 9 LLS+G+P Sbjct: 75 LLSLGLP 81>XP_005253308 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSIGVP 9 LLS+G+P Sbjct: 970 LLSLGLP 976>XP_005250772 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>XP_005250771 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>XP_005250770 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLLSIGV 8 ++LLS+GV Sbjct: 446 MILLSVGV 453>XP_005244926 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILLLSIGVP 9 +LLL GVP Sbjct: 5 LLLLICGVP 13>NP_001956 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LLSIGVP 9 LLS+G P Sbjct: 313 LLSVGAP 319>NP_001138526 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLLSIGVP 9 +LLS GVP Sbjct: 555 VLLSSGVP 562Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.162 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 506,908 Number of extensions: 1134 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |