Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 509 XP_005265800 20 509 XP_006714103 20 509 XP_006714102 20 509 NP_001155238 17 3301 NP_000678 17 3301 XP_005260374 17 3301 XP_005260373 17 3301 NP_001014809 17 4312 NP_001275591 17 4312 NP_001304 17 4312 NP_001275590 17 4312 NP_001377 17 4312 NP_001184222 17 4312 NP_001231533 17 4312 NP_001123380 17 4312 XP_005248000 17 4312 XP_005247999 17 4312 XP_005247998 17 4312 XP_005247997 17 4312 NP_776176 16 5631 NP_001177131 16 5631 XP_005255954 16 5631 XP_006721241 16 5631 XP_005255953 16 5631 NP_001177130 16 5631 XP_006717822 16 7355 XP_006717821 16 7355 XP_005269749 16 7355 XP_006717820 16 7355 NP_065081 16 7355 NP_001276976 15 9605 NP_001276975 15 9605 NP_001229602 15 9605 NP_056143 15 9605 NP_006612 15 9605 NP_001229604 15 9605 NP_001229603 15 9605 NP_001229605 15 9605 NP_001124194 15 9605 NP_067646 15 9605 NP_001124192 15 9605 NP_001124195 15 9605 XP_006724141 15 9605 XP_005250294 15 9605 XP_006711542 15 9605 XP_006711541 15 9605 XP_005245460 15 9605>NP_006197 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLAQGKIV Sbjct: 824 VLLAQGKIV 832>XP_005265800 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLAQGKIV Sbjct: 824 VLLAQGKIV 832>XP_006714103 Length = 1111 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLAQGKIV Sbjct: 846 VLLAQGKIV 854>XP_006714102 Length = 1114 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLAQGKIV Sbjct: 849 VLLAQGKIV 857>NP_001155238 Length = 404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ILLA+G++V Sbjct: 309 ILLAEGRLV 317>NP_000678 Length = 432 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ILLA+G++V Sbjct: 337 ILLAEGRLV 345>XP_005260374 Length = 404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ILLA+G++V Sbjct: 309 ILLAEGRLV 317>XP_005260373 Length = 404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ILLA+G++V Sbjct: 309 ILLAEGRLV 317>NP_001014809 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 559 VVISQGKIV 567>NP_001275591 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 439 VVISQGKIV 447>NP_001304 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 445 VVISQGKIV 453>NP_001275590 Length = 570 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 443 VVISQGKIV 451>NP_001377 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 445 VVISQGKIV 453>NP_001184222 Length = 677 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 550 VVISQGKIV 558>NP_001231533 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 409 VVISQGKIV 417>NP_001123380 Length = 575 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLAQGKIV 9 LLAQG++V Sbjct: 271 LLAQGEVV 278>XP_005248000 Length = 597 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 443 VVISQGKIV 451>XP_005247999 Length = 599 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 445 VVISQGKIV 453>XP_005247998 Length = 689 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 559 VVISQGKIV 567>XP_005247997 Length = 713 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 ++++QGKIV Sbjct: 559 VVISQGKIV 567>NP_776176 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 333 VLLTQGKV 340>NP_001177131 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 239 VLLTQGKV 246>XP_005255954 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 139 VLLTQGKV 146>XP_006721241 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 139 VLLTQGKV 146>XP_005255953 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 356 VLLTQGKV 363>NP_001177130 Length = 463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 235 VLLTQGKV 242>XP_006717822 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 672 VLLLQGKV 679>XP_006717821 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 672 VLLLQGKV 679>XP_005269749 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 672 VLLLQGKV 679>XP_006717820 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 672 VLLLQGKV 679>NP_065081 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILLAQGKI 8 +LL QGK+ Sbjct: 672 VLLLQGKV 679>NP_001276976 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLAQGK 7 LLAQGK Sbjct: 384 LLAQGK 389>NP_001276975 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLAQGK 7 LLAQGK Sbjct: 221 LLAQGK 226>NP_001229602 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 388 VLLAEGRLL 396>NP_056143 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 516 VLLAEGRLL 524>NP_006612 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 435 VLLAEGRLL 443>NP_001229604 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 388 VLLAEGRLL 396>NP_001229603 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 388 VLLAEGRLL 396>NP_001229605 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 388 VLLAEGRLL 396>NP_001124194 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 413 VLLAEGRLL 421>NP_067646 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLAQGKI 8 ILL+QG++ Sbjct: 172 ILLSQGEV 179>NP_001124192 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 515 VLLAEGRLL 523>NP_001124195 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 413 VLLAEGRLL 421>XP_006724141 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLAQGK 7 LLAQGK Sbjct: 346 LLAQGK 351>XP_005250294 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILLAQGKIV 9 +LLA+G+++ Sbjct: 414 VLLAEGRLL 422>XP_006711542 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLAQGKI 8 ILL+QG++ Sbjct: 210 ILLSQGEV 217>XP_006711541 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLAQGKI 8 ILL+QG++ Sbjct: 210 ILLSQGEV 217>XP_005245460 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILLAQGKI 8 ILL+QG++ Sbjct: 210 ILLSQGEV 217Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.153 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,723 Number of extensions: 463 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |