Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 21 229 XP_006713721 21 229 NP_703143 17 2528 NP_001267474 17 3301 NP_060732 17 3301 NP_443715 17 3301 NP_443716 17 3301 NP_001267470 17 3301 NP_443711 17 3301 NP_001267475 17 3301 NP_775919 17 3301 XP_006713758 17 3301 XP_006713757 17 3301 XP_006713756 17 3301 XP_005247668 17 3301 XP_006713755 17 3301 XP_005247667 17 3301 XP_005247666 17 3301 XP_005247665 17 3301 XP_005247664 17 3301 XP_006713754 17 3301 XP_006713753 17 3301 XP_005247661 17 3301 XP_006713752 17 3301 XP_005247660 17 3301 XP_006712503 17 3301 XP_006710324 17 3301 NP_065961 17 4312 NP_001158137 17 4312 XP_006716134 17 4312 NP_663314 16 5631 NP_055271 16 5631 NP_001186421 16 5631 NP_036553 16 5631 NP_077734 16 5631 XP_006717830 16 5631 XP_005269759 16 5631 XP_005245325 16 5631 XP_005245324 16 5631 NP_055907 16 7355 NP_443188 16 7355 NP_006047 16 7355 NP_002938 16 7355 XP_003960419 16 7355 XP_005255242 16 7355 XP_005255241 16 7355 XP_005255240 16 7355 XP_005255239 16 7355 XP_006721081 16 7355 XP_005255143 16 7355 XP_006721079 16 7355 XP_005255141 16 7355 XP_003846394 16 7355 XP_006712259 16 7355 XP_006712258 16 7355 XP_003846733 16 7355 NP_004611 15 9605 NP_665802 15 9605 NP_000043 15 9605 NP_001269153 15 9605 NP_003317 15 9605 NP_001138462 15 9605 NP_940862 15 9605 NP_203124 15 9605 NP_821158 15 9605 NP_001361 15 9605 NP_057438 15 9605 NP_075048 15 9605 XP_005260260 15 9605 XP_005263286 15 9605 XP_006712019 15 9605 XP_006710456 15 9605>NP_006209 Length = 1068 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILCATYVSV 9 ILCATYV+V Sbjct: 338 ILCATYVNV 346>XP_006713721 Length = 1068 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILCATYVSV 9 ILCATYV+V Sbjct: 338 ILCATYVNV 346>NP_703143 Length = 337 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILCATYVSV 9 +LC TY+ V Sbjct: 187 VLCCTYLKV 195>NP_001267474 Length = 1091 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 659 LLCATYL 665>NP_060732 Length = 1182 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 750 LLCATYL 756>NP_443715 Length = 1241 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 809 LLCATYL 815>NP_443716 Length = 1131 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 698 LLCATYL 704>NP_001267470 Length = 1234 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 801 LLCATYL 807>NP_443711 Length = 1292 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 860 LLCATYL 866>NP_001267475 Length = 1032 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 600 LLCATYL 606>NP_775919 Length = 1530 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LCATYVSV 9 LC YVSV Sbjct: 1514 LCVVYVSV 1521>XP_006713758 Length = 877 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 809 LLCATYL 815>XP_006713757 Length = 1034 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 600 LLCATYL 606>XP_006713756 Length = 1093 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 659 LLCATYL 665>XP_005247668 Length = 1132 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 698 LLCATYL 704>XP_006713755 Length = 1165 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 732 LLCATYL 738>XP_005247667 Length = 1183 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 750 LLCATYL 756>XP_005247666 Length = 1183 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 750 LLCATYL 756>XP_005247665 Length = 1184 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 750 LLCATYL 756>XP_005247664 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 757 LLCATYL 763>XP_006713754 Length = 1224 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 791 LLCATYL 797>XP_006713753 Length = 1225 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 791 LLCATYL 797>XP_005247661 Length = 1242 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 809 LLCATYL 815>XP_006713752 Length = 1242 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 809 LLCATYL 815>XP_005247660 Length = 1243 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LCATY+ Sbjct: 809 LLCATYL 815>XP_006712503 Length = 1470 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LCATYVSV 9 LC YVSV Sbjct: 1454 LCVVYVSV 1461>XP_006710324 Length = 943 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCATYVSV 9 LCA+YV V Sbjct: 16 LCASYVPV 23>NP_065961 Length = 1934 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILCATYVSV 9 I ATYVSV Sbjct: 137 IFVATYVSV 145>NP_001158137 Length = 1950 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILCATYVSV 9 I ATYVSV Sbjct: 137 IFVATYVSV 145>XP_006716134 Length = 1847 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILCATYVSV 9 I ATYVSV Sbjct: 61 IFVATYVSV 69>NP_663314 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC TY+ Sbjct: 262 ILCNTYI 268>NP_055271 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC TY+ Sbjct: 273 ILCNTYI 279>NP_001186421 Length = 455 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC TY+ Sbjct: 259 ILCNTYI 265>NP_036553 Length = 1914 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ILCATYVS 8 +LC TY++ Sbjct: 297 VLCTTYLT 304>NP_077734 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CATYVS 8 CATYV+ Sbjct: 220 CATYVA 225>XP_006717830 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC TY+ Sbjct: 87 ILCNTYI 93>XP_005269759 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC TY+ Sbjct: 87 ILCNTYI 93>XP_005245325 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CATYVS 8 CATYV+ Sbjct: 160 CATYVA 165>XP_005245324 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CATYVS 8 CATYV+ Sbjct: 183 CATYVA 188>NP_055907 Length = 3661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LCATY 6 LCATY Sbjct: 253 LCATY 257>NP_443188 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ILCATY 6 ++CATY Sbjct: 374 LICATY 379>NP_006047 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LCATYVSV 9 +CATY+ + Sbjct: 63 ICATYLLI 70>NP_002938 Length = 121 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC +YV Sbjct: 79 ILCTSYV 85>XP_003960419 Length = 209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILCATYVS 8 +LC YVS Sbjct: 111 LLCPVYVS 118>XP_005255242 Length = 3609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LCATY 6 LCATY Sbjct: 201 LCATY 205>XP_005255241 Length = 3637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LCATY 6 LCATY Sbjct: 201 LCATY 205>XP_005255240 Length = 3663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LCATY 6 LCATY Sbjct: 227 LCATY 231>XP_005255239 Length = 3689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LCATY 6 LCATY Sbjct: 253 LCATY 257>XP_006721081 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ILCATY 6 ++CATY Sbjct: 154 LICATY 159>XP_005255143 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ILCATY 6 ++CATY Sbjct: 194 LICATY 199>XP_006721079 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ILCATY 6 ++CATY Sbjct: 374 LICATY 379>XP_005255141 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ILCATY 6 ++CATY Sbjct: 374 LICATY 379>XP_003846394 Length = 209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILCATYVS 8 +LC YVS Sbjct: 111 LLCPVYVS 118>XP_006712259 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LCATYVSV 9 +CATY+ + Sbjct: 63 ICATYLLI 70>XP_006712258 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LCATYVSV 9 +CATY+ + Sbjct: 63 ICATYLLI 70>XP_003846733 Length = 209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILCATYVS 8 +LC YVS Sbjct: 111 LLCPVYVS 118>NP_004611 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CATYVSV 9 CA Y+S+ Sbjct: 403 CANYISL 409>NP_665802 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CATYVSV 9 CA Y+S+ Sbjct: 403 CANYISL 409>NP_000043 Length = 1500 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 ++CAT+V Sbjct: 901 LICATHV 907>NP_001269153 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 ++CAT+V Sbjct: 823 LICATHV 829>NP_003317 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 +LC TY+ Sbjct: 37 LLCFTYI 43>NP_001138462 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 LCATYVS 8 LC TY S Sbjct: 379 LCKTYAS 385>NP_940862 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LC+T+V Sbjct: 121 LLCSTFV 127>NP_203124 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCATYVS 8 +CA+YV+ Sbjct: 26 ICASYVT 32>NP_821158 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LCATYVSV 9 LC TY+++ Sbjct: 554 LCGTYLAL 561>NP_001361 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC T+V Sbjct: 1988 ILCQTFV 1994>NP_057438 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCATYVS 8 LC T+VS Sbjct: 155 LCLTFVS 161>NP_075048 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 LCATYVS 8 LC YVS Sbjct: 841 LCGNYVS 847>XP_005260260 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCATYVS 8 LC T+VS Sbjct: 155 LCLTFVS 161>XP_005263286 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 +LC TYV Sbjct: 12 MLCYTYV 18>XP_006712019 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ILCATYV 7 ILC T+V Sbjct: 1988 ILCQTFV 1994>XP_006710456 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ILCATYV 7 +LC+T+V Sbjct: 121 LLCSTFV 127Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.138 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 617,908 Number of extensions: 864 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |