Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 509 XP_006714104 20 509 XP_005265800 20 509 XP_006714103 20 509 XP_006714102 20 509 NP_001273336 17 2528 NP_689473 17 2528 NP_115984 17 3301 NP_000740 16 5631 NP_077014 16 5631 XP_005255628 16 5631 XP_005255627 16 5631 NP_001192157 15 9605 NP_002950 15 9605 NP_006693 15 9605 NP_001159583 15 9605 NP_001159585 15 9605 NP_001159586 15 9605 NP_001159584 15 9605 NP_795352 15 9605 NP_055429 15 9605 NP_006416 15 9605 XP_005262372 15 9605 XP_005262371 15 9605 XP_005265850 15 9605 XP_006712032 15 9605 XP_006710875 15 9605 XP_005271159 15 9605 XP_005271158 15 9605 XP_005271157 15 9605 XP_005270402 15 9605 XP_005270400 15 9605 XP_006710340 15 9605 XP_005270398 15 9605 XP_006710339 15 9605 XP_006710338 15 9605>NP_006197 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILAQNEDAV 9 I+AQNEDAV Sbjct: 394 IVAQNEDAV 402>XP_006714104 Length = 832 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILAQNEDAV 9 I+AQNEDAV Sbjct: 419 IVAQNEDAV 427>XP_005265800 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILAQNEDAV 9 I+AQNEDAV Sbjct: 394 IVAQNEDAV 402>XP_006714103 Length = 1111 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILAQNEDAV 9 I+AQNEDAV Sbjct: 416 IVAQNEDAV 424>XP_006714102 Length = 1114 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILAQNEDAV 9 I+AQNEDAV Sbjct: 419 IVAQNEDAV 427>NP_001273336 Length = 484 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILAQNEDAV 9 +LA+NED V Sbjct: 164 LLAENEDVV 172>NP_689473 Length = 545 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILAQNEDAV 9 +LA+NED V Sbjct: 225 LLAENEDVV 233>NP_115984 Length = 817 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LAQNEDAV 9 LA+NEDA+ Sbjct: 650 LAENEDAL 657>NP_000740 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LAQNEDAV 9 +A+NEDA+ Sbjct: 25 IAENEDAL 32>NP_077014 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILAQ ED V Sbjct: 148 ILAQEEDDV 156>XP_005255628 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILAQ ED V Sbjct: 148 ILAQEEDDV 156>XP_005255627 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILAQ ED V Sbjct: 148 ILAQEEDDV 156>NP_001192157 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILA N+D V Sbjct: 216 ILAANDDMV 224>NP_002950 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILA N+D V Sbjct: 353 ILAANDDMV 361>NP_006693 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQNEDA 8 LAQ EDA Sbjct: 794 LAQQEDA 800>NP_001159583 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQNEDA 8 LAQ EDA Sbjct: 842 LAQQEDA 848>NP_001159585 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQNEDA 8 LAQ EDA Sbjct: 794 LAQQEDA 800>NP_001159586 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQNEDA 8 LAQ EDA Sbjct: 832 LAQQEDA 838>NP_001159584 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQNEDA 8 LAQ EDA Sbjct: 767 LAQQEDA 773>NP_795352 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325>NP_055429 Length = 1843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ILAQNEDAV 9 I NEDAV Sbjct: 1675 IFLNNEDAV 1683>NP_006416 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 +LAQ ED V Sbjct: 390 LLAQTEDYV 398>XP_005262372 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQNEDA 8 L+QNED+ Sbjct: 21 LSQNEDS 27>XP_005262371 Length = 1107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQNEDA 8 L+QNED+ Sbjct: 101 LSQNEDS 107>XP_005265850 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 +LAQ ED V Sbjct: 400 LLAQTEDYV 408>XP_006712032 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ILAQNEDAV 9 I NEDAV Sbjct: 833 IFLNNEDAV 841>XP_006710875 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILA N+D V Sbjct: 217 ILAANDDMV 225>XP_005271159 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILA N+D V Sbjct: 217 ILAANDDMV 225>XP_005271158 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILA N+D V Sbjct: 217 ILAANDDMV 225>XP_005271157 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 ILA N+D V Sbjct: 352 ILAANDDMV 360>XP_005270402 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325>XP_005270400 Length = 1668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325>XP_006710340 Length = 1815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325>XP_005270398 Length = 1882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325>XP_006710339 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325>XP_006710338 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILAQNEDAV 9 + +NEDAV Sbjct: 1317 VFIRNEDAV 1325Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.126 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 561,254 Number of extensions: 622 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |