Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_001185763 19 869 NP_055459 19 869 XP_006726436 19 869 XP_006711784 19 869 XP_006711719 19 869 XP_006711718 19 869 XP_006711717 19 869 XP_006711716 19 869 XP_006711715 19 869 XP_006711714 19 869 XP_006711713 19 869 XP_006711712 19 869 XP_006711711 19 869 XP_006711710 19 869 XP_006711709 19 869 XP_005277503 19 869 XP_005273038 19 869 XP_006711708 19 869 XP_005277500 19 869 XP_006711707 19 869 XP_005277499 19 869 XP_006711706 19 869 XP_006711705 19 869 XP_006710122 19 869 XP_006726410 17 2528 XP_006711164 17 2528 XP_005276114 17 2528 NP_001095271 17 4312 NP_001095270 17 4312 XP_005272064 17 4312 NP_001609 16 5631 NP_055461 16 7355 NP_443109 16 7355 NP_001001653 16 7355 NP_963836 16 7355 XP_005258236 16 7355 XP_006722431 16 7355 XP_005258235 16 7355 XP_005258234 16 7355 NP_001186566 15 9605 NP_001109 15 9605 NP_001186564 15 9605 NP_001186565 15 9605 NP_001243199 15 9605 NP_015556 15 9605 NP_851607 15 9605 NP_065156 15 9605 NP_001243198 15 9605 XP_005259257 15 9605 XP_005249675 15 9605 XP_006715711 15 9605 XP_006715710 15 9605 XP_006715709 15 9605 XP_006715708 15 9605 XP_006711529 15 9605 XP_006711528 15 9605 NP_060828 15 9605 NP_003361 15 9605 NP_919268 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2179 KVSKQERL 2186>NP_001185763 Length = 2362 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2285 KVSKQERL 2292>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2285 KVSKQERL 2292>XP_006726436 Length = 178 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 63 KVSKQERL 70>XP_006711784 Length = 178 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 63 KVSKQERL 70>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2241 KVSKQERL 2248>XP_006711718 Length = 1436 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 1292 KVSKQERL 1299>XP_006711717 Length = 2385 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2241 KVSKQERL 2248>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2350 KVSKQERL 2357>XP_006711715 Length = 2428 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2284 KVSKQERL 2291>XP_006711714 Length = 2429 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2285 KVSKQERL 2292>XP_006711713 Length = 2432 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2288 KVSKQERL 2295>XP_006711712 Length = 2473 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2329 KVSKQERL 2336>XP_006711711 Length = 2482 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2338 KVSKQERL 2345>XP_006711710 Length = 2494 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2350 KVSKQERL 2357>XP_006711709 Length = 2495 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2351 KVSKQERL 2358>XP_005277503 Length = 2498 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2448 KVSKQERL 2455>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2448 KVSKQERL 2455>XP_006711708 Length = 2512 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2368 KVSKQERL 2375>XP_005277500 Length = 2525 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2448 KVSKQERL 2455>XP_006711707 Length = 2553 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2409 KVSKQERL 2416>XP_005277499 Length = 2561 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2448 KVSKQERL 2455>XP_006711706 Length = 2591 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2447 KVSKQERL 2454>XP_006711705 Length = 2592 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 2448 KVSKQERL 2455>XP_006710122 Length = 126 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQERL Sbjct: 63 KVSKQERL 70>XP_006726410 Length = 2087 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQE+L Sbjct: 2026 KVSKQEQL 2033>XP_006711164 Length = 2087 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQE+L Sbjct: 2026 KVSKQEQL 2033>XP_005276114 Length = 134 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KVSKQERL 9 KVSKQE+L Sbjct: 33 KVSKQEQL 40>NP_001095271 Length = 791 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKVSKQER 8 IKV+K+ER Sbjct: 601 IKVTKEER 608>NP_001095270 Length = 887 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKVSKQER 8 IKV+K+ER Sbjct: 697 IKVTKEER 704>XP_005272064 Length = 909 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKVSKQER 8 IKV+K+ER Sbjct: 719 IKVTKEER 726>NP_001609 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSKQERL 9 +KV KQ+R+ Sbjct: 348 LKVKKQDRI 356>NP_055461 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 KVSK+ER Sbjct: 274 KVSKRER 280>NP_443109 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 K+SK+ER Sbjct: 153 KISKEER 159>NP_001001653 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 K+SK+ER Sbjct: 64 KISKEER 70>NP_963836 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 K+SK+ER Sbjct: 153 KISKEER 159>XP_005258236 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 KVSK+ER Sbjct: 274 KVSKRER 280>XP_006722431 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 KVSK+ER Sbjct: 274 KVSKRER 280>XP_005258235 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 KVSK+ER Sbjct: 274 KVSKRER 280>XP_005258234 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVSKQER 8 KVSK+ER Sbjct: 311 KVSKRER 317>NP_001186566 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 355 VSKRERL 361>NP_001109 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 376 VSKRERL 382>NP_001186564 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 404 VSKRERL 410>NP_001186565 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 403 VSKRERL 409>NP_001243199 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSKQERL 9 +KV ++ERL Sbjct: 184 VKVDQRERL 192>NP_015556 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSKQERL 9 +KV ++ERL Sbjct: 252 VKVDQRERL 260>NP_851607 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KVSKQER 8 KVS QER Sbjct: 639 KVSSQER 645>NP_065156 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KVSKQER 8 KVS QER Sbjct: 585 KVSSQER 591>NP_001243198 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSKQERL 9 +KV ++ERL Sbjct: 184 VKVDQRERL 192>XP_005259257 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KVSKQE 7 KVSKQE Sbjct: 237 KVSKQE 242>XP_005249675 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 319 VSKRERL 325>XP_006715711 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 347 VSKRERL 353>XP_006715710 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 383 VSKRERL 389>XP_006715709 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 397 VSKRERL 403>XP_006715708 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSKQERL 9 VSK+ERL Sbjct: 404 VSKRERL 410>XP_006711529 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KVSKQER 8 KVS QER Sbjct: 443 KVSSQER 449>XP_006711528 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KVSKQER 8 KVS QER Sbjct: 639 KVSSQER 645>NP_060828 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SKQERL 9 SKQERL Sbjct: 415 SKQERL 420>NP_003361 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KVSKQE 7 KVSKQE Sbjct: 237 KVSKQE 242>NP_919268 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSKQERL 9 +K SK+E+L Sbjct: 157 LKCSKEEKL 165Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.128 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,818 Number of extensions: 642 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |