Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 869 NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 NP_003048 17 2528 NP_694857 17 2528 XP_006726853 17 2528 XP_006723596 17 2528 XP_005267162 17 2528 XP_005267161 17 2528 XP_006715615 17 2528 XP_005267160 17 2528 XP_005267159 17 2528 XP_006710111 17 2528 NP_001070650 17 3301 NP_036550 17 3301 NP_079366 17 3301 XP_005257601 17 3301 XP_005257599 17 3301 XP_005257600 17 3301 XP_005257253 17 3301 XP_005257252 17 3301 NP_056507 17 4312 NP_758441 17 4312 NP_525022 16 5631 NP_001275915 16 5631 NP_001275914 16 5631 NP_009099 16 5631 NP_525021 16 5631 XP_005276813 16 5631 XP_005256997 16 5631 XP_005256995 16 5631 XP_005256993 16 5631 XP_005256992 16 5631 XP_006721697 16 5631 XP_006721696 16 5631 XP_005256991 16 5631 XP_005248455 16 5631 NP_001790 16 5631 NP_001119516 16 7355 NP_942012 16 7355 NP_942008 16 7355 NP_942007 16 7355 NP_942009 16 7355 NP_942011 16 7355 NP_942010 16 7355 NP_001181988 16 7355 NP_001010893 16 7355 NP_079477 16 7355 NP_001230913 15 9605 NP_068810 15 9605 NP_001138610 15 9605 NP_001230914 15 9605 NP_001009 15 9605 NP_003260 15 9605 NP_001273031 15 9605 XP_006712357 15 9605 XP_006712356 15 9605 XP_006712355 15 9605 NP_000982 15 9605>NP_001243398 Length = 1781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKRKRTFVL 9 IKRKR FVL Sbjct: 829 IKRKRPFVL 837>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKRKRTFVL 9 IKRKR FVL Sbjct: 1121 IKRKRPFVL 1129>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKRKRTFVL 9 IKRKR FVL Sbjct: 938 IKRKRPFVL 946>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKRKRTFVL 9 IKRKR FVL Sbjct: 1121 IKRKRPFVL 1129>NP_003048 Length = 554 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 344 RKRTFIL 350>NP_694857 Length = 506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_006726853 Length = 707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKRKRTFV 8 +KR+RTFV Sbjct: 222 LKRQRTFV 229>XP_006723596 Length = 707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKRKRTFV 8 +KR+RTFV Sbjct: 222 LKRQRTFV 229>XP_005267162 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 152 RKRTFIL 158>XP_005267161 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 152 RKRTFIL 158>XP_006715615 Length = 483 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_005267160 Length = 573 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_005267159 Length = 610 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_006710111 Length = 566 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKRKRTFV 8 +KR+RTFV Sbjct: 81 LKRQRTFV 88>NP_001070650 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IKRKRTFVL 9 +KRK+T+VL Sbjct: 40 LKRKQTWVL 48>NP_036550 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IKRKRTFVL 9 +KRK+T+VL Sbjct: 40 LKRKQTWVL 48>NP_079366 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KRKRTFV 8 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257601 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KRKRTFV 8 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257599 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KRKRTFV 8 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257600 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KRKRTFV 8 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257253 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IKRKRTFVL 9 +KRK+T+VL Sbjct: 40 LKRKQTWVL 48>XP_005257252 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IKRKRTFVL 9 +KRK+T+VL Sbjct: 40 LKRKQTWVL 48>NP_056507 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KRKRTF 7 KRKRTF Sbjct: 788 KRKRTF 793>NP_758441 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IKRKRTF 7 IK+KRTF Sbjct: 210 IKQKRTF 216>NP_525022 Length = 1624 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1425 IKRKLCFVL 1433>NP_001275915 Length = 1616 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1417 IKRKLCFVL 1425>NP_001275914 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1422 IKRKLCFVL 1430>NP_009099 Length = 1581 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1382 IKRKLCFVL 1390>NP_525021 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1344 IKRKLCFVL 1352>XP_005276813 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRKRT L Sbjct: 270 IKRKRTEAL 278>XP_005256997 Length = 1560 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1361 IKRKLCFVL 1369>XP_005256995 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1422 IKRKLCFVL 1430>XP_005256993 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1344 IKRKLCFVL 1352>XP_005256992 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1344 IKRKLCFVL 1352>XP_006721697 Length = 1625 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1433 IKRKLCFVL 1441>XP_006721696 Length = 1632 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1433 IKRKLCFVL 1441>XP_005256991 Length = 1632 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRK FVL Sbjct: 1433 IKRKLCFVL 1441>XP_005248455 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRKRT L Sbjct: 270 IKRKRTEAL 278>NP_001790 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 IKRKRT L Sbjct: 327 IKRKRTEAL 335>NP_001119516 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942012 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942008 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942007 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942009 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942011 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942010 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRKRTFVL 9 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_001181988 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 +KRK F+L Sbjct: 28 LKRKHRFIL 36>NP_001010893 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KRKRTFVL 9 KRKR F++ Sbjct: 431 KRKRNFLI 438>NP_079477 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IKRKRTFVL 9 +KRK F+L Sbjct: 78 LKRKHRFIL 86>NP_001230913 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KRKRTF 7 KRKRT+ Sbjct: 301 KRKRTY 306>NP_068810 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KRKRTF 7 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001138610 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KRKRTF 7 KRKRT+ Sbjct: 298 KRKRTY 303>NP_001230914 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KRKRTF 7 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001009 Length = 145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KRKRTF 7 K+KRTF Sbjct: 7 KKKRTF 12>NP_003260 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKRKRTFV 8 I+R RT+V Sbjct: 44 IRRNRTYV 51>NP_001273031 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKRKRTFV 8 I+R RT+V Sbjct: 81 IRRNRTYV 88>XP_006712357 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 +K+TFVL Sbjct: 183 KKKTFVL 189>XP_006712356 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 +K+TFVL Sbjct: 182 KKKTFVL 188>XP_006712355 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKRTFVL 9 +K+TFVL Sbjct: 183 KKKTFVL 189>NP_000982 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IKRKRT 6 +KRKRT Sbjct: 126 VKRKRT 131Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.153 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,547 Number of extensions: 740 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |