Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 XP_005264328 19 665 XP_005268803 17 4312 XP_005268802 17 4312 XP_005268801 17 4312 XP_005268800 17 4312 XP_005268799 17 4312 NP_001004715 17 4312 NP_056090 17 4312 NP_945328 16 7355 NP_945353 16 7355 NP_004697 16 7355 NP_055426 16 7355 NP_056240 16 7355 XP_006723526 16 7355 XP_005259447 16 7355 XP_005259446 16 7355 XP_005259445 16 7355 XP_005259444 16 7355 XP_005259443 16 7355 XP_006717839 16 7355 XP_006717838 16 7355 XP_006717836 16 7355 XP_006717835 16 7355 XP_005248757 16 7355 XP_006715468 16 7355 XP_005248756 16 7355 XP_006715467 16 7355 XP_006712046 16 7355 NP_055068 15 9605 NP_001156750 15 9605 NP_001156751 15 9605 NP_001273409 15 9605 NP_055598 15 9605 NP_112497 15 9605 NP_001159438 15 9605 NP_001273408 15 9605 XP_006725628 15 9605 XP_006725627 15 9605 XP_006724788 15 9605 XP_006721645 15 9605 XP_006720851 15 9605 XP_005254865 15 9605 XP_006720119 15 9605 NP_689659 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IKKQRVISD 9 IKK+RVISD Sbjct: 115 IKKRRVISD 123>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IKKQRVISD 9 IKK+RVISD Sbjct: 245 IKKRRVISD 253>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IKKQRVISD 9 IKK+RVISD Sbjct: 146 IKKRRVISD 154>XP_005268803 Length = 851 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + K+RVISD Sbjct: 518 VAKKRVISD 526>XP_005268802 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + K+RVISD Sbjct: 519 VAKKRVISD 527>XP_005268801 Length = 985 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + K+RVISD Sbjct: 330 VAKKRVISD 338>XP_005268800 Length = 986 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + K+RVISD Sbjct: 331 VAKKRVISD 339>XP_005268799 Length = 1174 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + K+RVISD Sbjct: 519 VAKKRVISD 527>NP_001004715 Length = 343 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IKKQRVIS 8 +KKQ+VIS Sbjct: 117 LKKQKVIS 124>NP_056090 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + K+RVISD Sbjct: 518 VAKKRVISD 526>NP_945328 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 382 VKRQEVISE 390>NP_945353 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 430 VKRQEVISE 438>NP_004697 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 415 VKRQEVISE 423>NP_055426 Length = 5596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 ++KQR +SD Sbjct: 4121 MQKQRALSD 4129>NP_056240 Length = 1720 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+QR+I + Sbjct: 810 VKRQRIIEE 818>XP_006723526 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 490 VKRQEVISE 498>XP_005259447 Length = 981 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 430 VKRQEVISE 438>XP_005259446 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 490 VKRQEVISE 498>XP_005259445 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 475 VKRQEVISE 483>XP_005259444 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 486 VKRQEVISE 494>XP_005259443 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+Q VIS+ Sbjct: 490 VKRQEVISE 498>XP_006717839 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKQRVISD 9 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_006717838 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKQRVISD 9 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_006717836 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKQRVISD 9 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_006717835 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKQRVISD 9 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_005248757 Length = 3591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 ++KQR +SD Sbjct: 2116 MQKQRALSD 2124>XP_006715468 Length = 3744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 ++KQR +SD Sbjct: 2269 MQKQRALSD 2277>XP_005248756 Length = 3905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 ++KQR +SD Sbjct: 2430 MQKQRALSD 2438>XP_006715467 Length = 5550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 ++KQR +SD Sbjct: 4121 MQKQRALSD 4129>XP_006712046 Length = 1612 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 +K+QR+I + Sbjct: 702 VKRQRIIEE 710>NP_055068 Length = 2725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IKKQRVISD 9 + QRV+SD Sbjct: 964 VTMQRVVSD 972>NP_001156750 Length = 2732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IKKQRVISD 9 + QRV+SD Sbjct: 964 VTMQRVVSD 972>NP_001156751 Length = 2731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IKKQRVISD 9 + QRV+SD Sbjct: 963 VTMQRVVSD 971>NP_001273409 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 758 VYKQKILSD 766>NP_055598 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 947 VYKQKILSD 955>NP_112497 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IKKQRVIS 8 ++KQRV+S Sbjct: 787 MQKQRVVS 794>NP_001159438 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IKKQRVIS 8 ++KQRV+S Sbjct: 751 MQKQRVVS 758>NP_001273408 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 758 VYKQKILSD 766>XP_006725628 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 918 VYKQKILSD 926>XP_006725627 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 947 VYKQKILSD 955>XP_006724788 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IKKQRVISD 9 + QRV+SD Sbjct: 802 VTMQRVVSD 810>XP_006721645 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IKKQRVIS 8 ++KQRV+S Sbjct: 746 MQKQRVVS 753>XP_006720851 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 758 VYKQKILSD 766>XP_005254865 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IKKQRVISD 9 + KQ+++SD Sbjct: 918 VYKQKILSD 926>XP_006720119 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKQRVISD 9 +KQ V+SD Sbjct: 211 QKQEVVSD 218>NP_689659 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKQRVISD 9 +KQ V+SD Sbjct: 211 QKQEVVSD 218Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.135 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,020 Number of extensions: 583 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |