Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 869 NP_001006619 17 3301 NP_001006618 17 3301 NP_001006620 17 3301 NP_077022 17 3301 NP_001006621 17 3301 NP_001006622 17 3301 NP_001888 16 5631 NP_114418 16 5631 NP_001116451 16 5631 NP_001164102 16 5631 XP_005273343 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_002200 16 7355 NP_003090 16 7355 NP_001243779 16 7355 NP_001107852 16 7355 NP_001229862 16 7355 NP_596869 16 7355 NP_683758 16 7355 NP_003881 16 7355 NP_065764 16 7355 XP_005260283 16 7355 XP_006721107 16 7355 XP_005255370 16 7355 XP_005254668 16 7355 XP_005254667 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_640339 15 9605 NP_054722 15 9605 NP_001163935 15 9605 NP_001640 15 9605 NP_002586 15 9605 NP_056502 15 9605 NP_001276916 15 9605 XP_005276387 15 9605 XP_005274557 15 9605 XP_005256326 15 9605 XP_006719507 15 9605 XP_006717042 15 9605 XP_005251797 15 9605 XP_005272420 15 9605 XP_005248771 15 9605 XP_005248770 15 9605 XP_005276080 15 9605>NP_002430 Length = 1137 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 IKGSQ ISG Sbjct: 483 IKGSQIISG 491>NP_001006619 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGSQ +SG Sbjct: 313 KGSQKVSG 320>NP_001006618 Length = 522 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGSQ +SG Sbjct: 313 KGSQKVSG 320>NP_001006620 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGSQ +SG Sbjct: 313 KGSQKVSG 320>NP_077022 Length = 486 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGSQ +SG Sbjct: 313 KGSQKVSG 320>NP_001006621 Length = 330 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGSQ +SG Sbjct: 121 KGSQKVSG 128>NP_001006622 Length = 330 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGSQ +SG Sbjct: 121 KGSQKVSG 128>NP_001888 Length = 2322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IKGSQTIS 8 +KGSQT++ Sbjct: 1584 LKGSQTLT 1591>NP_114418 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KGS+ +SG Sbjct: 109 LKGSRLVSG 117>NP_001116451 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KGS+ +SG Sbjct: 109 LKGSRLVSG 117>NP_001164102 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KGS+ +SG Sbjct: 109 LKGSRLVSG 117>XP_005273343 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KGS+ +SG Sbjct: 109 LKGSRLVSG 117>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 5376 LKGTQEITG 5384>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 5501 LKGTQEITG 5509>NP_002200 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 I+G+Q +SG Sbjct: 569 IEGTQVLSG 577>NP_003090 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GSQTISG 9 G+QT+SG Sbjct: 275 GTQTLSG 281>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 12800 LKGTQEITG 12808>NP_001107852 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 I+G+Q +SG Sbjct: 486 IEGTQVLSG 494>NP_001229862 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GSQTISG 9 G+QT+SG Sbjct: 275 GTQTLSG 281>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 11873 LKGTQEITG 11881>NP_683758 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GSQTISG 9 G+QT+SG Sbjct: 210 GTQTLSG 216>NP_003881 Length = 5405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGSQTIS 8 +GSQT+S Sbjct: 912 RGSQTVS 918>NP_065764 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IKGSQTISG 9 ++G QT+ G Sbjct: 45 VRGGQTVPG 53>XP_005260283 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IKGSQTISG 9 ++G QT+ G Sbjct: 59 VRGGQTVPG 67>XP_006721107 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 I+G+Q +SG Sbjct: 486 IEGTQVLSG 494>XP_005255370 Length = 1169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 I+G+Q +SG Sbjct: 569 IEGTQVLSG 577>XP_005254668 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GSQTISG 9 G+QT+SG Sbjct: 117 GTQTLSG 123>XP_005254667 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GSQTISG 9 G+QT+SG Sbjct: 177 GTQTLSG 183>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 1113 LKGTQEITG 1121>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 2472 LKGTQEITG 2480>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 12428 LKGTQEITG 12436>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 13934 LKGTQEITG 13942>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 14441 LKGTQEITG 14449>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKGSQTISG 9 +KG+Q I+G Sbjct: 5568 LKGTQEITG 5576>NP_640339 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGS+ +SG Sbjct: 462 KGSRKVSG 469>NP_054722 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KGSQTI 7 KGSQT+ Sbjct: 446 KGSQTV 451>NP_001163935 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IKGSQTI 7 ++GSQTI Sbjct: 12 LRGSQTI 18>NP_001640 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 +GSQ +SG Sbjct: 1134 RGSQHVSG 1141>NP_002586 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IKGSQTI 7 ++GSQTI Sbjct: 12 LRGSQTI 18>NP_056502 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q++SG Sbjct: 1140 RGTQSVSG 1147>NP_001276916 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q++SG Sbjct: 1143 RGTQSVSG 1150>XP_005276387 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q+ISG Sbjct: 73 QGNQSISG 80>XP_005274557 Length = 1615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 +GSQ +SG Sbjct: 1134 RGSQHVSG 1141>XP_005256326 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KGSQTI 7 KGSQT+ Sbjct: 411 KGSQTV 416>XP_006719507 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IKGSQTI 7 ++GSQTI Sbjct: 12 LRGSQTI 18>XP_006717042 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGS+ +SG Sbjct: 236 KGSRKVSG 243>XP_005251797 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KGSQTISG 9 KGS+ +SG Sbjct: 421 KGSRKVSG 428>XP_005272420 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q+ISG Sbjct: 73 QGNQSISG 80>XP_005248771 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q++SG Sbjct: 1140 RGTQSVSG 1147>XP_005248770 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q++SG Sbjct: 1140 RGTQSVSG 1147>XP_005276080 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSQTISG 9 +G+Q+ISG Sbjct: 73 QGNQSISG 80Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.125 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,151 Number of extensions: 748 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |