Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 869 XP_005273257 19 869 NP_003240 17 3301 NP_073567 17 4312 NP_001269879 17 4312 NP_001269878 17 4312 NP_001269881 17 4312 NP_001269880 17 4312 XP_006712756 17 4312 XP_006712755 17 4312 NP_001154976 16 5631 NP_733844 16 5631 NP_003739 16 5631 NP_219493 16 5631 NP_001033043 16 5631 XP_006726466 16 5631 XP_005277785 16 5631 XP_005277784 16 5631 XP_005277783 16 5631 XP_006712969 16 5631 XP_006710208 16 5631 NP_663622 16 7355 XP_005251162 16 7355 XP_005251161 16 7355 XP_005251160 16 7355 XP_005251159 16 7355 NP_001138560 16 7355 NP_004278 15 9605 NP_001012529 15 9605 NP_000032 15 9605 NP_473363 15 9605 NP_001193928 15 9605 NP_005427 15 9605 NP_009105 15 9605 XP_005258924 15 9605 XP_005257902 15 9605 XP_005257901 15 9605 XP_006722255 15 9605 XP_006722254 15 9605 XP_006722253 15 9605 XP_006722252 15 9605 XP_006722251 15 9605 XP_005257900 15 9605 XP_005253886 15 9605 XP_006719269 15 9605>NP_064450 Length = 1722 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IIQAKIDQ 8 IIQAKIDQ Sbjct: 1617 IIQAKIDQ 1624>XP_005273257 Length = 1726 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IIQAKIDQ 8 IIQAKIDQ Sbjct: 1621 IIQAKIDQ 1628>NP_003240 Length = 689 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IIQAKIDQA 9 I+ AK+DQA Sbjct: 555 IVLAKVDQA 563>NP_073567 Length = 264 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 140 IIQGKLDQ 147>NP_001269879 Length = 273 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 140 IIQGKLDQ 147>NP_001269878 Length = 230 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 106 IIQGKLDQ 113>NP_001269881 Length = 157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 33 IIQGKLDQ 40>NP_001269880 Length = 209 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 85 IIQGKLDQ 92>XP_006712756 Length = 278 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 140 IIQGKLDQ 147>XP_006712755 Length = 278 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 IIQ K+DQ Sbjct: 140 IIQGKLDQ 147>NP_001154976 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IIQAKIDQA 9 +IQA+ID A Sbjct: 95 VIQAEIDAA 103>NP_733844 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IIQAKIDQA 9 +IQA+ID A Sbjct: 155 VIQAEIDAA 163>NP_003739 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IIQAKIDQA 9 +IQA+ID A Sbjct: 155 VIQAEIDAA 163>NP_219493 Length = 472 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IIQAKIDQA 9 IIQ+++DQ+ Sbjct: 127 IIQSRLDQS 135>NP_001033043 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IIQAKIDQA 9 IIQ+++DQ+ Sbjct: 338 IIQSRLDQS 346>XP_006726466 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQAKIDQA 9 +QA++DQA Sbjct: 868 LQARLDQA 875>XP_005277785 Length = 478 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IIQAKIDQA 9 IIQ+++DQ+ Sbjct: 127 IIQSRLDQS 135>XP_005277784 Length = 688 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IIQAKIDQA 9 IIQ+++DQ+ Sbjct: 337 IIQSRLDQS 345>XP_005277783 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IIQAKIDQA 9 IIQ+++DQ+ Sbjct: 338 IIQSRLDQS 346>XP_006712969 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQAKIDQA 9 +QA++DQA Sbjct: 868 LQARLDQA 875>XP_006710208 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQAKIDQA 9 +QA++DQA Sbjct: 224 LQARLDQA 231>NP_663622 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 712 MQAKVDQ 718>XP_005251162 Length = 961 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 607 MQAKVDQ 613>XP_005251161 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 633 MQAKVDQ 639>XP_005251160 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 712 MQAKVDQ 718>XP_005251159 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 712 MQAKVDQ 718>NP_001138560 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 712 MQAKVDQ 718>NP_004278 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>NP_001012529 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>NP_000032 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAKIDQA 9 QAK++QA Sbjct: 17 QAKVEQA 23>NP_473363 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>NP_001193928 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 1268 LQAKMDQ 1274>NP_005427 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IIQAKIDQ 8 I+Q K+DQ Sbjct: 230 ILQEKLDQ 237>NP_009105 Length = 2027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 1226 LQAKMDQ 1232>XP_005258924 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAKIDQA 9 QAK++QA Sbjct: 43 QAKVEQA 49>XP_005257902 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 19 IQASIDQ 25>XP_005257901 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722255 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722254 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722253 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722252 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722251 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 19 IQASIDQ 25>XP_005257900 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IQAKIDQ 8 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_005253886 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 760 LQAKMDQ 766>XP_006719269 Length = 2054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQAKIDQ 8 +QAK+DQ Sbjct: 1268 LQAKMDQ 1274Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.135 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 332,813 Number of extensions: 776 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |