Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_001714 17 2528 XP_005249383 17 2528 NP_003310 17 4312 NP_597676 17 4312 NP_001243779 17 4312 NP_596869 17 4312 XP_005246888 17 4312 XP_006712788 17 4312 XP_006712787 17 4312 XP_006712786 17 4312 NP_001254479 17 4312 NP_597681 17 4312 NP_055178 16 7355 NP_001129628 16 7355 NP_001264984 16 7355 NP_008877 16 7355 NP_003119 16 7355 NP_055725 16 7355 XP_005266395 16 7355 XP_005274250 16 7355 XP_006718734 16 7355 XP_006718733 16 7355 XP_005274249 16 7355 XP_006718732 16 7355 XP_006713658 16 7355 XP_005264575 16 7355 XP_006712150 16 7355 XP_005264574 16 7355 NP_842565 16 7355 NP_000490 15 9605 NP_065733 15 9605 NP_056099 15 9605 NP_001106962 15 9605 NP_060842 15 9605 XP_005262146 15 9605 XP_005262145 15 9605 XP_005262144 15 9605 XP_005254242 15 9605 XP_006710826 15 9605 XP_005271086 15 9605 XP_006710565 15 9605 XP_006710564 15 9605 XP_005270743 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IINIVLEKQ 9 IIN+VLEKQ Sbjct: 2517 IINVVLEKQ 2525>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IINIVLEKQ 9 IIN+VLEKQ Sbjct: 2312 IINVVLEKQ 2320>NP_001714 Length = 2649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 NIVLEKQ 9 NIVLEKQ Sbjct: 1599 NIVLEKQ 1605>XP_005249383 Length = 3186 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 NIVLEKQ 9 NIVLEKQ Sbjct: 2136 NIVLEKQ 2142>NP_003310 Length = 26926 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 11139 VINYIVEKQ 11147Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 20900 IINYVIEKR 20908Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 8336 IINYTLEKK 8344>NP_597676 Length = 27051 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 11264 VINYIVEKQ 11272Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 21025 IINYVIEKR 21033Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 8461 IINYTLEKK 8469>NP_001243779 Length = 34350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 18563 VINYIVEKQ 18571Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 28324 IINYVIEKR 28332Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 15760 IINYTLEKK 15768>NP_596869 Length = 33423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 17636 VINYIVEKQ 17644Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 27397 IINYVIEKR 27405Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 14833 IINYTLEKK 14841>XP_005246888 Length = 22663 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 6876 VINYIVEKQ 6884Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 16637 IINYVIEKR 16645Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 4073 IINYTLEKK 4081>XP_006712788 Length = 24022 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 8235 VINYIVEKQ 8243Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 17996 IINYVIEKR 18004Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 5432 IINYTLEKK 5440>XP_006712787 Length = 33978 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 18191 VINYIVEKQ 18199Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 27952 IINYVIEKR 27960Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 15388 IINYTLEKK 15396>XP_006712786 Length = 35484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 19697 VINYIVEKQ 19705Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 29458 IINYVIEKR 29466Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 16894 IINYTLEKK 16902>NP_001254479 Length = 35991 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 20204 VINYIVEKQ 20212Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 29965 IINYVIEKR 29973Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 17401 IINYTLEKK 17409>NP_597681 Length = 27118 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN ++EKQ Sbjct: 11331 VINYIVEKQ 11339Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 IIN V+EK+ Sbjct: 21092 IINYVIEKR 21100Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IINIVLEKQ 9 IIN LEK+ Sbjct: 8528 IINYTLEKK 8536>NP_055178 Length = 4579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NIVLE++ Sbjct: 375 VNIVLEEE 382>NP_001129628 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IINIVLEK 8 I+NI+L K Sbjct: 937 IVNIILNK 944>NP_001264984 Length = 4432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NIVLE++ Sbjct: 228 VNIVLEEE 235>NP_008877 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>NP_003119 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1415 VNILLKKQ 1422>NP_055725 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IINIVLEK 8 I+NI+L K Sbjct: 937 IVNIILNK 944>XP_005266395 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NIVLE++ Sbjct: 375 VNIVLEEE 382>XP_005274250 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_006718734 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_006718733 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_005274249 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_006718732 Length = 2397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1425 VNILLKKQ 1432>XP_006713658 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 IN+V+EK+ Sbjct: 176 INLVIEKR 183>XP_005264575 Length = 2351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1402 VNILLKKQ 1409>XP_006712150 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1415 VNILLKKQ 1422>XP_005264574 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1415 VNILLKKQ 1422>NP_842565 Length = 2155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INIVLEKQ 9 +NI+L+KQ Sbjct: 1402 VNILLKKQ 1409>NP_000490 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IINIVLE 7 IINIVL+ Sbjct: 307 IINIVLD 313>NP_065733 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IINIVLEKQ 9 +IN+V +KQ Sbjct: 157 VINLVPDKQ 165>NP_056099 Length = 3375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IINIVLE 7 IIN+VLE Sbjct: 840 IINMVLE 846>NP_001106962 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NIVLEKQ 9 N+++EKQ Sbjct: 89 NLIMEKQ 95>NP_060842 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IINIVLEK 8 ++NIVL K Sbjct: 411 VVNIVLAK 418>XP_005262146 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NIVLEKQ 9 N+++EKQ Sbjct: 89 NLIMEKQ 95>XP_005262145 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NIVLEKQ 9 N+++EKQ Sbjct: 89 NLIMEKQ 95>XP_005262144 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NIVLEKQ 9 N+++EKQ Sbjct: 89 NLIMEKQ 95>XP_005254242 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IINIVLE 7 IINIVL+ Sbjct: 307 IINIVLD 313>XP_006710826 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IINIVLEK 8 ++NIVL K Sbjct: 411 VVNIVLAK 418>XP_005271086 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IINIVLEK 8 ++NIVL K Sbjct: 411 VVNIVLAK 418>XP_006710565 Length = 3140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IINIVLE 7 IIN+VLE Sbjct: 548 IINMVLE 554>XP_006710564 Length = 3432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IINIVLE 7 IIN+VLE Sbjct: 840 IINMVLE 846>XP_005270743 Length = 3453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IINIVLE 7 IIN+VLE Sbjct: 861 IINMVLE 867Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.148 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 506,402 Number of extensions: 835 Number of successful extensions: 65 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |