Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_000375 17 3301 XP_006716433 17 4312 XP_005273633 17 4312 XP_006716432 17 4312 XP_005273632 17 4312 NP_001276915 16 7355 NP_060328 16 7355 NP_073616 16 7355 NP_001153508 16 7355 XP_006720657 16 7355 XP_005254579 16 7355 XP_005254578 16 7355 XP_006720656 16 7355 XP_006717299 16 7355 XP_005272265 16 7355 XP_005272264 16 7355 XP_005272263 16 7355 XP_006716378 16 7355 XP_006711056 16 7355 NP_001185498 16 7355 NP_001685 16 7355 NP_001153509 16 7355 NP_055993 16 7355 NP_115266 16 7355 NP_619526 16 7355 NP_061745 16 7355 NP_008914 16 7355 NP_000043 15 9605 NP_001269153 15 9605 NP_001275915 15 9605 NP_001275914 15 9605 NP_009099 15 9605 XP_005256997 15 9605 XP_005256995 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IIANALNSE 9 IIANAL+SE Sbjct: 3336 IIANALSSE 3344>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IIANALNSE 9 IIANAL+SE Sbjct: 3336 IIANALSSE 3344>NP_000375 Length = 4563 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IANALNSE 9 IAN LNSE Sbjct: 597 IANILNSE 604>XP_006716433 Length = 3069 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANALNSE 9 + NALNSE Sbjct: 221 LCNALNSE 228>XP_005273633 Length = 3069 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANALNSE 9 + NALNSE Sbjct: 221 LCNALNSE 228>XP_006716432 Length = 3172 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANALNSE 9 + NALNSE Sbjct: 324 LCNALNSE 331>XP_005273632 Length = 3172 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANALNSE 9 + NALNSE Sbjct: 324 LCNALNSE 331>NP_001276915 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IANALNSE 9 IAN LN E Sbjct: 167 IANTLNEE 174>NP_060328 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IANALNSE 9 IAN LN E Sbjct: 268 IANTLNEE 275>NP_073616 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +I NA+N+E Sbjct: 404 VILNAVNAE 412>NP_001153508 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 ++AN LN+E Sbjct: 485 MVANILNNE 493>XP_006720657 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IANALNSE 9 IAN LN E Sbjct: 268 IANTLNEE 275>XP_005254579 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IANALNSE 9 IAN LN E Sbjct: 268 IANTLNEE 275>XP_005254578 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IANALNSE 9 IAN LN E Sbjct: 268 IANTLNEE 275>XP_006720656 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IANALNSE 9 IAN LN E Sbjct: 268 IANTLNEE 275>XP_006717299 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +I NA+N+E Sbjct: 404 VILNAVNAE 412>XP_005272265 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +I NA+N+E Sbjct: 275 VILNAVNAE 283>XP_005272264 Length = 755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +I NA+N+E Sbjct: 308 VILNAVNAE 316>XP_005272263 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +I NA+N+E Sbjct: 404 VILNAVNAE 412>XP_006716378 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 ++AN LN+E Sbjct: 485 MVANILNNE 493>XP_006711056 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IIANALN 7 IIANA+N Sbjct: 357 IIANAVN 363>NP_001185498 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +IAN+LN + Sbjct: 75 LIANSLNDD 83>NP_001685 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +IAN+LN + Sbjct: 75 LIANSLNDD 83>NP_001153509 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 ++AN LN+E Sbjct: 470 MVANILNNE 478>NP_055993 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 ++AN LN+E Sbjct: 463 MVANILNNE 471>NP_115266 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IIANALNSE 9 +IA ALN E Sbjct: 401 VIAGALNRE 409>NP_619526 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIANALNSE 9 +I NA+N+E Sbjct: 404 VILNAVNAE 412>NP_061745 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IIANALNSE 9 +IA ALN E Sbjct: 401 VIAGALNRE 409>NP_008914 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IIANALN 7 IIANA+N Sbjct: 358 IIANAVN 364>NP_000043 Length = 1500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IANALNSE 9 I+NALN++ Sbjct: 1169 ISNALNAQ 1176>NP_001269153 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IANALNSE 9 I+NALN++ Sbjct: 1091 ISNALNAQ 1098>NP_001275915 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ANALNS 8 ANALNS Sbjct: 1261 ANALNS 1266>NP_001275914 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ANALNS 8 ANALNS Sbjct: 1266 ANALNS 1271>NP_009099 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ANALNS 8 ANALNS Sbjct: 1226 ANALNS 1231>XP_005256997 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ANALNS 8 ANALNS Sbjct: 1205 ANALNS 1210>XP_005256995 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ANALNS 8 ANALNS Sbjct: 1266 ANALNS 1271Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.121 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 285,942 Number of extensions: 346 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |