Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 20 509 XP_005273257 20 509 NP_002411 17 4312 NP_001238953 17 4312 NP_001238949 17 4312 NP_055723 16 5631 NP_066566 16 5631 NP_542119 16 5631 NP_666018 16 7355 NP_036471 16 7355 NP_001138571 16 7355 NP_060055 16 7355 NP_006381 16 7355 NP_945327 16 7355 XP_005269724 16 7355 XP_005269723 16 7355 XP_006717801 16 7355 NP_001035207 15 9605 NP_001017967 15 9605 NP_612396 15 9605 NP_001007254 15 9605 NP_079247 15 9605 NP_001007472 15 9605 NP_066003 15 9605 NP_996830 15 9605 NP_996829 15 9605 NP_996828 15 9605 NP_996827 15 9605 XP_005252275 15 9605>NP_064450 Length = 1722 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IIAMGVLLP 9 IIAMG+LLP Sbjct: 565 IIAMGLLLP 573>XP_005273257 Length = 1726 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IIAMGVLLP 9 IIAMG+LLP Sbjct: 565 IIAMGLLLP 573>NP_002411 Length = 1603 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + MG+LLP Sbjct: 751 VIMGILLP 758>NP_001238953 Length = 1625 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + MG+LLP Sbjct: 773 VIMGILLP 780>NP_001238949 Length = 1642 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + MG+LLP Sbjct: 790 VIMGILLP 797>NP_055723 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IIAMGVLLP 9 ++++GV+LP Sbjct: 265 VLSLGVVLP 273>NP_066566 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 +AMG +LP Sbjct: 301 VAMGAVLP 308>NP_542119 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IIAMGVLLP 9 IIA VLLP Sbjct: 245 IIATAVLLP 253>NP_666018 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IIAMGVLLP 9 + A+G+L+P Sbjct: 427 LFALGILVP 435>NP_036471 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 I +G+LLP Sbjct: 237 ILLGILLP 244>NP_001138571 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGVLLP 9 + A+G+LLP Sbjct: 184 LYALGLLLP 192>NP_060055 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGVLLP 9 + A+G+LLP Sbjct: 184 LYALGLLLP 192>NP_006381 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IIAMGVLLP 9 IIAM + LP Sbjct: 172 IIAMQIFLP 180>NP_945327 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IIAMGVL 7 ++AMGVL Sbjct: 431 VVAMGVL 437>XP_005269724 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 I +G+LLP Sbjct: 150 ILLGILLP 157>XP_005269723 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 I +G+LLP Sbjct: 172 ILLGILLP 179>XP_006717801 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 I +G+LLP Sbjct: 213 ILLGILLP 220>NP_001035207 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGVLLP 9 ++ MG+LLP Sbjct: 46 LMDMGMLLP 54>NP_001017967 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IIAMGVLL 8 ++ MGVLL Sbjct: 279 VLTMGVLL 286>NP_612396 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGVLLP 9 ++AMG+L P Sbjct: 288 VLAMGLLGP 296>NP_001007254 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGVLLP 9 I++MG L P Sbjct: 126 IVSMGSLFP 134>NP_079247 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 634 VILGILLP 641>NP_001007472 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 775 VILGILLP 782>NP_066003 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 622 VILGILLP 629>NP_996830 Length = 1569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 637 VILGILLP 644>NP_996829 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 647 VILGILLP 654>NP_996828 Length = 1556 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 624 VILGILLP 631>NP_996827 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 612 VILGILLP 619>XP_005252275 Length = 1734 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGVLLP 9 + +G+LLP Sbjct: 802 VILGILLP 809Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.159 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,985 Number of extensions: 571 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |