Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001004432 17 2528 NP_003652 17 3301 NP_001130012 17 3301 NP_663318 17 3301 NP_001130013 17 3301 NP_064450 17 3301 XP_005261853 17 3301 XP_005261852 17 3301 XP_005273257 17 3301 NP_003027 16 5631 NP_872296 16 5631 NP_054747 16 5631 NP_001276098 16 5631 NP_001276097 16 5631 NP_001276096 16 5631 NP_001276095 16 5631 NP_060681 16 5631 XP_006723433 16 5631 XP_005259289 16 5631 XP_006715527 16 5631 XP_005244832 16 5631 XP_006710801 16 5631 NP_112235 16 7355 NP_001188478 16 7355 NP_001827 16 7355 NP_001188476 16 7355 NP_004687 16 7355 NP_001051 16 7355 NP_963998 16 7355 NP_077283 16 7355 XP_005259057 16 7355 XP_005259056 16 7355 XP_006723307 16 7355 XP_005259055 16 7355 XP_005271375 16 7355 XP_005271374 16 7355 NP_059128 16 7355 NP_001933 15 9605 NP_037434 15 9605 NP_112092 15 9605 NP_001230925 15 9605 NP_001027 15 9605 NP_612396 15 9605 NP_663612 15 9605 NP_056535 15 9605 XP_005276554 15 9605 XP_006724281 15 9605 XP_006724280 15 9605>NP_001004432 Length = 593 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 535 VLAVGFLPF 543>NP_003652 Length = 398 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ MGL PF Sbjct: 191 LVGMGLAPF 199>NP_001130012 Length = 398 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ MGL PF Sbjct: 191 LVGMGLAPF 199>NP_663318 Length = 414 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ MGL PF Sbjct: 207 LVGMGLAPF 215>NP_001130013 Length = 380 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ MGL PF Sbjct: 173 LVGMGLAPF 181>NP_064450 Length = 1722 Score = 16.9 bits (32), Expect = 3301 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 IIAMG-LLPF 9 IIAMG LLPF Sbjct: 565 IIAMGLLLPF 574>XP_005261853 Length = 380 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ MGL PF Sbjct: 173 LVGMGLAPF 181>XP_005261852 Length = 396 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ MGL PF Sbjct: 189 LVGMGLAPF 197>XP_005273257 Length = 1726 Score = 16.9 bits (32), Expect = 3301 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 IIAMG-LLPF 9 IIAMG LLPF Sbjct: 565 IIAMGLLLPF 574>NP_003027 Length = 728 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MGLLPF 9 MG+LPF Sbjct: 164 MGILPF 169>NP_872296 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 59 LVAVGHLPF 67>NP_054747 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 +A+G LPF Sbjct: 28 LALGALPF 35>NP_001276098 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 8 LVAVGHLPF 16>NP_001276097 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 8 LVAVGHLPF 16>NP_001276096 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 8 LVAVGHLPF 16>NP_001276095 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 59 LVAVGHLPF 67>NP_060681 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MGLLPF 9 MG+LPF Sbjct: 472 MGMLPF 477>XP_006723433 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 59 LVAVGHLPF 67>XP_005259289 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IIAMGLLPF 9 ++A+G LPF Sbjct: 59 LVAVGHLPF 67>XP_006715527 Length = 280 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 +A+G LPF Sbjct: 28 LALGALPF 35>XP_005244832 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MGLLPF 9 MG+LPF Sbjct: 164 MGILPF 169>XP_006710801 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MGLLPF 9 MG+LPF Sbjct: 441 MGMLPF 446>NP_112235 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 I MGL+P+ Sbjct: 521 IFMGLIPY 528>NP_001188478 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IAMGLLP 8 + MGLLP Sbjct: 115 VTMGLLP 121>NP_001827 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 +A+G LPF Sbjct: 124 LAVGTLPF 131>NP_001188476 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IAMGLLP 8 + MGLLP Sbjct: 53 VTMGLLP 59>NP_004687 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IAMGLLP 8 + MGLLP Sbjct: 115 VTMGLLP 121>NP_001051 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAMGLLP 8 +A+GLLP Sbjct: 161 LALGLLP 167>NP_963998 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAMGLLP 8 +A+GLLP Sbjct: 161 LALGLLP 167>NP_077283 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MGLLPF 9 +GLLPF Sbjct: 213 LGLLPF 218>XP_005259057 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 I MGL+P+ Sbjct: 213 IFMGLIPY 220>XP_005259056 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 I MGL+P+ Sbjct: 213 IFMGLIPY 220>XP_006723307 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 I MGL+P+ Sbjct: 228 IFMGLIPY 235>XP_005259055 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 I MGL+P+ Sbjct: 228 IFMGLIPY 235>XP_005271375 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IAMGLLP 8 + MGLLP Sbjct: 53 VTMGLLP 59>XP_005271374 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IAMGLLP 8 + MGLLP Sbjct: 115 VTMGLLP 121>NP_059128 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 I MGL+P+ Sbjct: 213 IFMGLIPY 220>NP_001933 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 + +GL+PF Sbjct: 559 LVLGLVPF 566>NP_037434 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AMGLLPF 9 +MGL PF Sbjct: 320 SMGLAPF 326>NP_112092 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ +GL PF Sbjct: 132 LLGLGLAPF 140>NP_001230925 Length = 4865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 +AMG+L F Sbjct: 1417 LAMGMLSF 1424>NP_001027 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAMGLLPF 9 +AMG+L F Sbjct: 1417 LAMGMLSF 1424>NP_612396 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IIAMGLL 7 ++AMGLL Sbjct: 288 VLAMGLL 294>NP_663612 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ +GL PF Sbjct: 132 LLGLGLAPF 140>NP_056535 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IIAMGLL 7 IIA+GLL Sbjct: 515 IIALGLL 521>XP_005276554 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AMGLLPF 9 +MGL PF Sbjct: 320 SMGLAPF 326>XP_006724281 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ +GL PF Sbjct: 132 LLGLGLAPF 140>XP_006724280 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IIAMGLLPF 9 ++ +GL PF Sbjct: 210 LLGLGLAPF 218Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.166 0.508 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 472,361 Number of extensions: 551 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |