Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 390 NP_671714 20 390 XP_006715890 20 390 XP_005250160 20 390 XP_005250159 20 390 NP_001092693 18 1482 NP_001092692 18 1482 NP_079379 18 1482 NP_001093164 17 3301 XP_006723084 17 3301 XP_006723083 17 3301 XP_006723082 17 3301 XP_005258584 17 3301 NP_001005376 16 5631 NP_001005377 16 5631 NP_002650 16 5631 NP_001131140 16 5631 NP_036247 16 5631 NP_001131139 16 5631 NP_005717 16 5631 NP_001166167 16 5631 XP_005259047 16 5631 XP_005259046 16 5631 XP_006723304 16 5631 XP_005259045 16 5631 NP_001104537 16 7355 NP_001096 16 7355 NP_001129243 16 7355 NP_665804 16 7355 NP_001092688 16 7355 NP_115605 16 7355 NP_002942 16 7355 XP_006723915 16 7355 XP_006723914 16 7355 XP_005260548 16 7355 XP_006723913 16 7355 XP_006723912 16 7355 XP_006723128 16 7355 XP_006723127 16 7355 XP_006712888 16 7355 XP_005246996 16 7355 XP_005246997 16 7355 XP_005262682 16 7355 NP_689816 16 7355 NP_001177 15 9605 NP_996749 15 9605 NP_078966 15 9605 NP_077008 15 9605 NP_001166045 15 9605 NP_078872 15 9605 NP_872335 15 9605 NP_002702 15 9605 NP_056052 15 9605 NP_001123947 15 9605 NP_003096 15 9605 XP_006724097 15 9605 XP_005261071 15 9605 XP_005261070 15 9605 XP_005261069 15 9605 XP_006723004 15 9605 XP_006722947 15 9605 XP_005266092 15 9605 XP_005266091 15 9605 XP_005250530 15 9605 NP_002998 15 9605>NP_005742 Length = 3907 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 IHSQ TNLE Sbjct: 1307 IHSQMTNLE 1315>NP_671714 Length = 3899 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 IHSQ TNLE Sbjct: 1307 IHSQMTNLE 1315>XP_006715890 Length = 3860 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 IHSQ TNLE Sbjct: 1307 IHSQMTNLE 1315>XP_005250160 Length = 3939 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 IHSQ TNLE Sbjct: 1307 IHSQMTNLE 1315>XP_005250159 Length = 3952 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 IHSQ TNLE Sbjct: 1307 IHSQMTNLE 1315>NP_001092693 Length = 600 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 HSQ TNLE Sbjct: 539 HSQLTNLE 546>NP_001092692 Length = 600 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 HSQ TNLE Sbjct: 539 HSQLTNLE 546>NP_079379 Length = 600 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 HSQ TNLE Sbjct: 539 HSQLTNLE 546>NP_001093164 Length = 590 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 + SQK+NLE Sbjct: 463 VFSQKSNLE 471>XP_006723084 Length = 562 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 + SQK+NLE Sbjct: 435 VFSQKSNLE 443>XP_006723083 Length = 590 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 + SQK+NLE Sbjct: 463 VFSQKSNLE 471>XP_006723082 Length = 590 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 + SQK+NLE Sbjct: 463 VFSQKSNLE 471>XP_005258584 Length = 590 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IHSQKTNLE 9 + SQK+NLE Sbjct: 463 VFSQKSNLE 471>NP_001005376 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 69 HSEKTN 74>NP_001005377 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 69 HSEKTN 74>NP_002650 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 69 HSEKTN 74>NP_001131140 Length = 1982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSQKTNLE 9 H QKTN E Sbjct: 496 HLQKTNKE 503>NP_036247 Length = 1982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSQKTNLE 9 H QKTN E Sbjct: 496 HLQKTNKE 503>NP_001131139 Length = 1982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSQKTNLE 9 H QKTN E Sbjct: 496 HLQKTNKE 503>NP_005717 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKTNLE 9 QKTNLE Sbjct: 245 QKTNLE 250>NP_001166167 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKTNLE 9 QKTNLE Sbjct: 266 QKTNLE 271>XP_005259047 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 69 HSEKTN 74>XP_005259046 Length = 286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 69 HSEKTN 74>XP_006723304 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 44 HSEKTN 49>XP_005259045 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HSQKTN 7 HS+KTN Sbjct: 64 HSEKTN 69>NP_001104537 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +HSQ TN Sbjct: 360 MHSQSTN 366>NP_001096 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +HSQ TN Sbjct: 360 MHSQSTN 366>NP_001129243 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 406 LHNQKTGQE 414>NP_665804 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 HS KT+L+ Sbjct: 261 HSDKTSLQ 268>NP_001092688 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +HSQ N+E Sbjct: 758 MHSQDLNME 766>NP_115605 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 IH Q+ N+E Sbjct: 345 IHCQERNIE 353>NP_002942 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 438 LHNQKTGQE 446>XP_006723915 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 454 LHNQKTGQE 462>XP_006723914 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 454 LHNQKTGQE 462>XP_005260548 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 438 LHNQKTGQE 446>XP_006723913 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 454 LHNQKTGQE 462>XP_006723912 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +H+QKT E Sbjct: 454 LHNQKTGQE 462>XP_006723128 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQKTNL 8 SQKTNL Sbjct: 515 SQKTNL 520>XP_006723127 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQKTNL 8 SQKTNL Sbjct: 515 SQKTNL 520>XP_006712888 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +HSQ TN Sbjct: 360 MHSQSTN 366>XP_005246996 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +HSQ TN Sbjct: 360 MHSQSTN 366>XP_005246997 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +HSQ TN Sbjct: 360 MHSQSTN 366>XP_005262682 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 +HSQ N+E Sbjct: 749 MHSQDLNME 757>NP_689816 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQKTNL 8 SQKTNL Sbjct: 484 SQKTNL 489>NP_001177 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 H QKT+L+ Sbjct: 149 HCQKTDLK 156>NP_996749 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 H QKT+L+ Sbjct: 149 HCQKTDLK 156>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSQKTNL 8 HS+ TNL Sbjct: 9699 HSEMTNL 9705>NP_077008 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +H+ KTN Sbjct: 215 VHASKTN 221>NP_001166045 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 + QKTNL+ Sbjct: 138 LQRQKTNLD 146>NP_078872 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 + QKTNL+ Sbjct: 138 LQRQKTNLD 146>NP_872335 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQKTNLE 9 SQK NLE Sbjct: 58 SQKKNLE 64>NP_002702 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSQKTNL 8 HS +TNL Sbjct: 583 HSPRTNL 589>NP_056052 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IHSQKTNL 8 IH Q TN+ Sbjct: 366 IHEQDTNV 373>NP_001123947 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQKTNLE 9 SQK NLE Sbjct: 100 SQKKNLE 106>NP_003096 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HSQKTN 7 HS KTN Sbjct: 1606 HSNKTN 1611>XP_006724097 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 H QKT+L+ Sbjct: 149 HCQKTDLK 156>XP_005261071 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 H QKT+L+ Sbjct: 149 HCQKTDLK 156>XP_005261070 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 H QKT+L+ Sbjct: 149 HCQKTDLK 156>XP_005261069 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSQKTNLE 9 H QKT+L+ Sbjct: 149 HCQKTDLK 156>XP_006723004 Length = 6443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSQKTNL 8 HS+ TNL Sbjct: 1613 HSEMTNL 1619>XP_006722947 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 IHSQKTN 7 +H+ KTN Sbjct: 215 VHASKTN 221>XP_005266092 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 + QKTNL+ Sbjct: 138 LQRQKTNLD 146>XP_005266091 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IHSQKTNLE 9 + QKTNL+ Sbjct: 138 LQRQKTNLD 146>XP_005250530 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSQKTNL 8 HS +TNL Sbjct: 382 HSPRTNL 388>NP_002998 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HSQKTN 7 HSQK N Sbjct: 339 HSQKAN 344Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.117 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 579,508 Number of extensions: 1283 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |