Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 19 665 NP_001020014 19 665 NP_055903 19 665 NP_689810 17 4312 XP_006720481 17 4312 XP_006720480 17 4312 XP_005254266 17 4312 XP_006720479 17 4312 XP_005254265 17 4312 NP_114032 16 5631 NP_004492 16 5631 NP_006717 16 5631 NP_001093591 16 5631 NP_001093590 16 5631 NP_001186211 16 5631 XP_005263433 16 5631 XP_005263432 16 5631 XP_005263431 16 5631 XP_006714492 16 5631 XP_005263430 16 5631 XP_005263429 16 5631 NP_001032401 16 5631 NP_055508 16 5631 NP_954592 16 7355 NP_001229265 16 7355 NP_001128509 16 7355 XP_005259765 16 7355 XP_006714485 16 7355 XP_005263416 16 7355 XP_006714483 16 7355 XP_005263415 16 7355 NP_005918 16 7355 NP_005378 15 9605 NP_624357 15 9605 NP_624358 15 9605 NP_057404 15 9605 NP_003881 15 9605 NP_056465 15 9605 NP_149973 15 9605 NP_001070817 15 9605 NP_071423 15 9605 NP_004897 15 9605 NP_001257460 15 9605 NP_149971 15 9605 XP_006723857 15 9605 XP_005260203 15 9605 XP_006718305 15 9605 XP_006718304 15 9605 XP_006718303 15 9605 XP_005253007 15 9605 XP_006714730 15 9605 XP_005272100 15 9605 XP_006712476 15 9605 XP_006712475 15 9605>NP_001155973 Length = 1833 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGSKSSNAN 9 IGSKSSNA+ Sbjct: 1467 IGSKSSNAS 1475>NP_001020014 Length = 1029 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGSKSSNAN 9 IGSKSSNA+ Sbjct: 663 IGSKSSNAS 671>NP_055903 Length = 1723 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGSKSSNAN 9 IGSKSSNA+ Sbjct: 1357 IGSKSSNAS 1365>NP_689810 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 GS+SSNA+ Sbjct: 23 GSRSSNAS 30>XP_006720481 Length = 406 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 GS+SSNA+ Sbjct: 23 GSRSSNAS 30>XP_006720480 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 GS+SSNA+ Sbjct: 23 GSRSSNAS 30>XP_005254266 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 GS+SSNA+ Sbjct: 23 GSRSSNAS 30>XP_006720479 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 GS+SSNA+ Sbjct: 23 GSRSSNAS 30>XP_005254265 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 GS+SSNA+ Sbjct: 23 GSRSSNAS 30>NP_114032 Length = 825 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSKSSNAN 9 GSK SN N Sbjct: 686 GSKKSNKN 693>NP_004492 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSKSSNAN 9 GSK SN N Sbjct: 667 GSKKSNKN 674>NP_006717 Length = 2863 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>NP_001093591 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKSSNAN 9 SKSSN+N Sbjct: 241 SKSSNSN 247>NP_001093590 Length = 811 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKSSNAN 9 SKSSN+N Sbjct: 287 SKSSNSN 293>NP_001186211 Length = 2851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>XP_005263433 Length = 2832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1733 GSRSSNA 1739>XP_005263432 Length = 2852 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>XP_005263431 Length = 2857 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>XP_006714492 Length = 2867 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>XP_005263430 Length = 2868 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>XP_005263429 Length = 2868 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GSKSSNA 8 GS+SSNA Sbjct: 1769 GSRSSNA 1775>NP_001032401 Length = 736 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKSSNAN 9 SKSSN+N Sbjct: 212 SKSSNSN 218>NP_055508 Length = 883 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKSSNAN 9 SKSSN+N Sbjct: 359 SKSSNSN 365>NP_954592 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GSKSSN 7 GSKSSN Sbjct: 460 GSKSSN 465>NP_001229265 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGSKSSNAN 9 IGS SN N Sbjct: 343 IGSAESNCN 351>NP_001128509 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGSKSSNAN 9 IGS SN N Sbjct: 197 IGSAESNCN 205>XP_005259765 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GSKSSN 7 GSKSSN Sbjct: 460 GSKSSN 465>XP_006714485 Length = 1585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGSKSSNAN 9 +GS++SN N Sbjct: 1196 LGSENSNKN 1204>XP_005263416 Length = 1693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGSKSSNAN 9 +GS++SN N Sbjct: 1304 LGSENSNKN 1312>XP_006714483 Length = 1695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGSKSSNAN 9 +GS++SN N Sbjct: 1306 LGSENSNKN 1314>XP_005263415 Length = 1701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGSKSSNAN 9 +GS++SN N Sbjct: 1312 LGSENSNKN 1320>NP_005918 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGSKSSNAN 9 IGS SN N Sbjct: 343 IGSAESNCN 351>NP_005378 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 675 GNKHSNSN 682>NP_624357 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 658 GNKHSNSN 665>NP_624358 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 658 GNKHSNSN 665>NP_057404 Length = 1800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 658 GNKHSNSN 665>NP_003881 Length = 5405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 GS++ NAN Sbjct: 1406 GSQAGNAN 1413Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 GS++ NAN Sbjct: 2607 GSQAGNAN 2614Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 GS++ NAN Sbjct: 3808 GSQAGNAN 3815>NP_056465 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGSKSSNAN 9 IG+K +N N Sbjct: 386 IGTKEANIN 394>NP_149973 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SKSSNAN 9 SKSSN N Sbjct: 155 SKSSNLN 161>NP_001070817 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SKSSNAN 9 SKSSN N Sbjct: 123 SKSSNLN 129>NP_071423 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 GS+S N+N Sbjct: 485 GSESENSN 492>NP_004897 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 G+KSSN++ Sbjct: 310 GNKSSNSS 317>NP_001257460 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSKSSNAN 9 G+KSSN++ Sbjct: 310 GNKSSNSS 317>NP_149971 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGSKSSN 7 +GSK+SN Sbjct: 150 LGSKASN 156>XP_006723857 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGSKSSN 7 +GSKS+N Sbjct: 8 LGSKSAN 14>XP_005260203 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SKSSNAN 9 SKSSN N Sbjct: 79 SKSSNLN 85>XP_006718305 Length = 1743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 675 GNKHSNSN 682>XP_006718304 Length = 1753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 611 GNKHSNSN 618>XP_006718303 Length = 1792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 650 GNKHSNSN 657>XP_005253007 Length = 1817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 G+K SN+N Sbjct: 675 GNKHSNSN 682>XP_006714730 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 GS+S N+N Sbjct: 112 GSESENSN 119>XP_005272100 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKSSNAN 9 GS+S N+N Sbjct: 457 GSESENSN 464>XP_006712476 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGSKSSNAN 9 IG+K +N N Sbjct: 362 IGTKEANIN 370>XP_006712475 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGSKSSNAN 9 IG+K +N N Sbjct: 386 IGTKEANIN 394Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.282 0.102 0.240 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,719 Number of extensions: 671 Number of successful extensions: 56 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |