Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_000332 18 1482 NP_036565 17 4312 NP_001139732 17 4312 NP_001139731 17 4312 NP_001139730 17 4312 NP_079055 17 4312 XP_006719667 17 4312 XP_005269209 17 4312 XP_005246485 17 4312 NP_001029031 16 5631 NP_001257377 16 5631 NP_000009 16 5631 NP_660160 16 5631 NP_001257376 16 5631 NP_848599 16 5631 XP_006721579 16 5631 XP_006713081 16 5631 NP_071387 16 5631 NP_620407 16 7355 NP_002736 16 7355 NP_075053 16 7355 NP_055417 16 7355 NP_066022 16 7355 NP_922932 16 7355 XP_006723369 16 7355 XP_006721061 16 7355 XP_006714735 16 7355 XP_005248626 16 7355 XP_006710064 16 7355 NP_001265492 16 7355 NP_597714 16 7355 NP_004987 15 9605 NP_005836 15 9605 NP_000383 15 9605 NP_055362 15 9605 NP_001186704 15 9605 NP_001264890 15 9605 NP_001295 15 9605 NP_001264891 15 9605 NP_003777 15 9605 NP_001229527 15 9605 NP_005883 15 9605 NP_001229588 15 9605 NP_003147 15 9605 XP_005257820 15 9605 XP_006722133 15 9605 XP_006722132 15 9605 XP_006722131 15 9605 XP_006722130 15 9605 XP_006722129 15 9605 XP_006722128 15 9605 XP_006722127 15 9605 XP_006722126 15 9605 XP_006722125 15 9605 XP_006720948 15 9605 XP_006720947 15 9605 XP_005255386 15 9605 XP_005255385 15 9605 XP_005255384 15 9605 XP_006720542 15 9605 XP_005254082 15 9605 XP_006719977 15 9605 XP_006717693 15 9605 NP_036474 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 I MHDIIAA Sbjct: 1301 IAMHDIIAA 1309>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 I MHDIIAA Sbjct: 1301 IAMHDIIAA 1309>NP_000332 Length = 685 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +GMHDI+ Sbjct: 355 VGMHDIV 361Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 IGM +I+AA Sbjct: 484 IGMGNIVAA 492>NP_036565 Length = 1304 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGMHDIIA 8 IG HD++A Sbjct: 1088 IGPHDVLA 1095>NP_001139732 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +G+HDII Sbjct: 237 LGIHDII 243>NP_001139731 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +G+HDII Sbjct: 267 LGIHDII 273>NP_001139730 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +G+HDII Sbjct: 285 LGIHDII 291>NP_079055 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +G+HDII Sbjct: 285 LGIHDII 291>XP_006719667 Length = 251 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +G+HDII Sbjct: 115 LGIHDII 121>XP_005269209 Length = 408 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +G+HDII Sbjct: 272 LGIHDII 278>XP_005246485 Length = 1158 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGMHDIIA 8 IG HD++A Sbjct: 942 IGPHDVLA 949>NP_001029031 Length = 633 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 +GMHD+ Sbjct: 145 VGMHDL 150>NP_001257377 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 +GMHD+ Sbjct: 91 VGMHDL 96>NP_000009 Length = 655 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 +GMHD+ Sbjct: 167 VGMHDL 172>NP_660160 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IGMHDIIA 8 +GMH IIA Sbjct: 66 LGMHVIIA 73>NP_001257376 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 +GMHD+ Sbjct: 190 VGMHDL 195>NP_848599 Length = 3092 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHDIIAA 9 +HD+IAA Sbjct: 1080 VHDVIAA 1086>XP_006721579 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 +GMHD+ Sbjct: 213 VGMHDL 218>XP_006713081 Length = 3964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHDIIAA 9 +HD+IAA Sbjct: 1103 VHDVIAA 1109>NP_071387 Length = 704 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IGMHDIIA 8 +G HD+I+ Sbjct: 77 LGQHDVIS 84>NP_620407 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 IG++DII A Sbjct: 84 IGINDIIRA 92>NP_002736 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 IG++DII A Sbjct: 84 IGINDIIRA 92>NP_075053 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GMHDIIA 8 G HD++A Sbjct: 741 GFHDVLA 747>NP_055417 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IGMHDII 7 +G HDII Sbjct: 1326 VGHHDII 1332>NP_066022 Length = 2564 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 IGMHDII 7 +G HDI+ Sbjct: 140 VGSHDIV 146>NP_922932 Length = 1117 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IGMHDIIA 8 +G+H +IA Sbjct: 152 VGLHGVIA 159>XP_006723369 Length = 2394 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 IGMHDII 7 +G HDI+ Sbjct: 140 VGSHDIV 146>XP_006721061 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GMHDII 7 G+HDI+ Sbjct: 676 GLHDIV 681>XP_006714735 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GMHDIIA 8 G HD++A Sbjct: 698 GFHDVLA 704>XP_005248626 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GMHDIIA 8 G HD++A Sbjct: 700 GFHDVLA 706>XP_006710064 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 GMHDII 7 G+HDI+ Sbjct: 676 GLHDIV 681>NP_001265492 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 IG+HD +A+ Sbjct: 385 IGIHDPLAS 393>NP_597714 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 IG+HD +A+ Sbjct: 383 IGIHDPLAS 391>NP_004987 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1361 IGLHDL 1366>NP_005836 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1108 IGLHDL 1113>NP_000383 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1368 IGLHDL 1373>NP_055362 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +GMH++I Sbjct: 138 LGMHNLI 144>NP_001186704 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMHDIIA 8 G+H+IIA Sbjct: 1008 GVHNIIA 1014>NP_001264890 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GMHDIIAA 9 G+H ++AA Sbjct: 446 GIHSLVAA 453>NP_001295 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMHDIIA 8 G+H+IIA Sbjct: 1255 GVHNIIA 1261>NP_001264891 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GMHDIIAA 9 G+H ++AA Sbjct: 446 GIHSLVAA 453>NP_003777 Length = 1527 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1357 IGLHDL 1362>NP_001229527 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGMHDIIAA 9 IG+H I+A+ Sbjct: 68 IGVHYIVAS 76>NP_005883 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 284 GGHDIILA 291>NP_001229588 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 GM DI+ A Sbjct: 179 GMQDIVVA 186>NP_003147 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GMHDIIAA 9 G+H ++AA Sbjct: 446 GIHSLVAA 453>XP_005257820 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1293 IGLHDL 1298>XP_006722133 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 284 GGHDIILA 291>XP_006722132 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 290 GGHDIILA 297>XP_006722131 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 284 GGHDIILA 291>XP_006722130 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 290 GGHDIILA 297>XP_006722129 Length = 1110 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 290 GGHDIILA 297>XP_006722128 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 274 GGHDIILA 281>XP_006722127 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 280 GGHDIILA 287>XP_006722126 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 284 GGHDIILA 291>XP_006722125 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GMHDIIAA 9 G HDII A Sbjct: 290 GGHDIILA 297>XP_006720948 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1231 IGLHDL 1236>XP_006720947 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1361 IGLHDL 1366>XP_005255386 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1302 IGLHDL 1307>XP_005255385 Length = 1485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1315 IGLHDL 1320>XP_005255384 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1319 IGLHDL 1324>XP_006720542 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGMHDII 7 +GMH++I Sbjct: 138 LGMHNLI 144>XP_005254082 Length = 1282 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1065 IGLHDL 1070>XP_006719977 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1078 IGLHDL 1083>XP_006717693 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IGMHDI 6 IG+HD+ Sbjct: 1136 IGLHDL 1141>NP_036474 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 2 GMHDIIA 8 G+HD+++ Sbjct: 108 GLHDVLS 114Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.148 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,648 Number of extensions: 624 Number of successful extensions: 67 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |