Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000312                                                              20     299
NP_001264220                                                           18    1135
XP_006719797                                                           18    1135
NP_000128                                                              18    1482
NP_006260                                                              17    2528
NP_689689                                                              17    2528
NP_001191335                                                           17    3301
NP_085128                                                              16    5631
NP_001265439                                                           16    5631
NP_055333                                                              16    5631
NP_689625                                                              16    5631
NP_001193938                                                           16    5631
NP_940860                                                              16    5631
NP_001269345                                                           16    5631
NP_001070663                                                           16    5631
NP_001027545                                                           16    5631
NP_001160005                                                           16    5631
XP_006723435                                                           16    5631
XP_005259285                                                           16    5631
XP_006723432                                                           16    5631
XP_006723431                                                           16    5631
XP_005259284                                                           16    5631
XP_006723430                                                           16    5631
XP_005259283                                                           16    5631
XP_005259282                                                           16    5631
XP_005259281                                                           16    5631
XP_005258464                                                           16    5631
NP_001136021                                                           16    5631
NP_077726                                                              16    5631
NP_694563                                                              16    5631
NP_005764                                                              16    5631
NP_001027544                                                           16    5631
NP_085137                                                              16    5631
NP_116194                                                              16    5631
NP_036363                                                              16    7355
NP_653271                                                              16    7355
NP_001007258                                                           16    7355
NP_056950                                                              16    7355
NP_116561                                                              16    7355
NP_001161840                                                           16    7355
NP_065743                                                              16    7355
NP_001276539                                                           16    7355
NP_001276538                                                           16    7355
NP_001276537                                                           16    7355
NP_001037853                                                           16    7355
NP_001037852                                                           16    7355
NP_112490                                                              16    7355
NP_077317                                                              16    7355
NP_001156425                                                           16    7355
NP_001156424                                                           16    7355
NP_001156423                                                           16    7355
NP_996813                                                              16    7355
NP_996812                                                              16    7355
NP_036265                                                              16    7355
NP_001276962                                                           16    7355
NP_001269344                                                           16    7355
NP_775871                                                              16    7355
XP_005274124                                                           16    7355
XP_006718653                                                           16    7355
XP_005274123                                                           16    7355
XP_005274120                                                           16    7355
XP_005274119                                                           16    7355
XP_005274118                                                           16    7355
XP_005274117                                                           16    7355
XP_005274116                                                           16    7355
XP_006718652                                                           16    7355
XP_005274115                                                           16    7355
XP_005274114                                                           16    7355
XP_005246055                                                           16    7355
XP_006710943                                                           16    7355
XP_006710942                                                           16    7355
XP_006710941                                                           16    7355
XP_005246054                                                           16    7355
XP_005246053                                                           16    7355
XP_006710940                                                           16    7355
XP_005246052                                                           16    7355
XP_005246051                                                           16    7355
XP_005246050                                                           16    7355
XP_005246049                                                           16    7355
NP_036270                                                              15    9605
NP_001274278                                                           15    9605
NP_001243208                                                           15    9605
NP_062537                                                              15    9605
NP_001243209                                                           15    9605
NP_056276                                                              15    9605
NP_006626                                                              15    9605
NP_997200                                                              15    9605
NP_060506                                                              15    9605
NP_061121                                                              15    9605
NP_001275519                                                           15    9605
XP_005258479                                                           15    9605
XP_006723039                                                           15    9605
XP_005258298                                                           15    9605
XP_006722500                                                           15    9605
XP_006722499                                                           15    9605
XP_006719809                                                           15    9605
XP_005266240                                                           15    9605
XP_005266239                                                           15    9605
XP_006719808                                                           15    9605
XP_006719807                                                           15    9605
XP_005265380                                                           15    9605
>NP_000312
          Length = 928

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   IGKSFGTSE 9
           IG+SFGTSE
Sbjct: 835 IGESFGTSE 843
>NP_001264220
          Length = 544

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   GKSFGTS 8
           GKSFGTS
Sbjct: 410 GKSFGTS 416
>XP_006719797
          Length = 437

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   GKSFGTS 8
           GKSFGTS
Sbjct: 410 GKSFGTS 416
>NP_000128
          Length = 419

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   IGKSFGTS 8
           +GKSFGT+
Sbjct: 251 LGKSFGTT 258
>NP_006260
          Length = 2156

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2    GKSFGTSE 9
            G+SFG+SE
Sbjct: 1677 GQSFGSSE 1684
>NP_689689
          Length = 790

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   GKSFGTS 8
           GK+FGTS
Sbjct: 410 GKAFGTS 416

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   GKSFGTS 8
           GK+FGTS
Sbjct: 466 GKAFGTS 472
>NP_001191335
          Length = 218

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  GKSFGT 7
          GKSFGT
Sbjct: 22 GKSFGT 27
>NP_085128
          Length = 2136

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    SFGTSE 9
            SFGTSE
Sbjct: 1379 SFGTSE 1384
>NP_001265439
          Length = 819

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 544 GKSFGRS 550
>NP_055333
          Length = 825

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 550 GKSFGRS 556
>NP_689625
          Length = 529

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 390 GKSFGLS 396
>NP_001193938
          Length = 498

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 196 GKSFGRS 202
>NP_940860
          Length = 498

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 196 GKSFGRS 202
>NP_001269345
          Length = 643

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 245 GKSFGRS 251

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GKSFG ++
Sbjct: 475 GKSFGQTQ 482
>NP_001070663
          Length = 470

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 200 GKSFGRS 206
>NP_001027545
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>NP_001160005
          Length = 704

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  IGKSFG 6
          +GKSFG
Sbjct: 87 VGKSFG 92
>XP_006723435
          Length = 797

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 522 GKSFGRS 528
>XP_005259285
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_006723432
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_006723431
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_005259284
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_006723430
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_005259283
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_005259282
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_005259281
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>XP_005258464
          Length = 474

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  GKSFGTS 8
          GKSF TS
Sbjct: 92 GKSFSTS 98
>NP_001136021
          Length = 690

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  IGKSFG 6
          +GKSFG
Sbjct: 87 VGKSFG 92
>NP_077726
          Length = 724

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  IGKSFG 6
          +GKSFG
Sbjct: 87 VGKSFG 92
>NP_694563
          Length = 502

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   GKSFGTS 8
           GK+FGT+
Sbjct: 175 GKTFGTN 181
>NP_005764
          Length = 627

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSF TS
Sbjct: 245 GKSFSTS 251
>NP_001027544
          Length = 803

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 649 GKSFGRS 655
>NP_085137
          Length = 470

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 200 GKSFGRS 206
>NP_116194
          Length = 725

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GKSFGTS 8
           GKSFG S
Sbjct: 327 GKSFGRS 333

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GKSFG ++
Sbjct: 557 GKSFGQTQ 564
>NP_036363
          Length = 1718

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 396 GKAFGT 401
>NP_653271
          Length = 1454

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 203 GKTFGT 208
>NP_001007258
          Length = 1481

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 195 GKAFGT 200
>NP_056950
          Length = 1682

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 396 GKAFGT 401
>NP_116561
          Length = 910

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 863 GKSYGT 868
>NP_001161840
          Length = 558

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   IGKSFGT 7
           IGK+FG+
Sbjct: 390 IGKAFGS 396
>NP_065743
          Length = 558

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   IGKSFGT 7
           IGK+FG+
Sbjct: 390 IGKAFGS 396
>NP_001276539
          Length = 336

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 289 GKSYGT 294
>NP_001276538
          Length = 255

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 208 GKSYGT 213
>NP_001276537
          Length = 902

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 855 GKSYGT 860
>NP_001037853
          Length = 423

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 291 GKAFGT 296
>NP_001037852
          Length = 430

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 298 GKAFGT 303
>NP_112490
          Length = 361

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   IGKSFGT 7
           +GKS+GT
Sbjct: 142 LGKSWGT 148
>NP_077317
          Length = 430

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 298 GKAFGT 303
>NP_001156425
          Length = 935

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 888 GKSYGT 893
>NP_001156424
          Length = 336

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 289 GKSYGT 294
>NP_001156423
          Length = 934

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 887 GKSYGT 892
>NP_996813
          Length = 365

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 318 GKSYGT 323
>NP_996812
          Length = 376

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 329 GKSYGT 334
>NP_036265
          Length = 871

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  GKSFGTSE 9
          G+ FGT+E
Sbjct: 58 GEHFGTTE 65
>NP_001276962
          Length = 726

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  GKSFGTSE 9
          G+ FGT+E
Sbjct: 58 GEHFGTTE 65
>NP_001269344
          Length = 386

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GKSFG ++
Sbjct: 218 GKSFGQTQ 225
>NP_775871
          Length = 8384

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    GKSFGTSE 9
            GK  GTSE
Sbjct: 6949 GKQAGTSE 6956
>XP_005274124
          Length = 376

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 329 GKSYGT 334
>XP_006718653
          Length = 376

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 329 GKSYGT 334
>XP_005274123
          Length = 894

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 847 GKSYGT 852
>XP_005274120
          Length = 911

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 864 GKSYGT 869
>XP_005274119
          Length = 924

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 877 GKSYGT 882
>XP_005274118
          Length = 950

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 903 GKSYGT 908
>XP_005274117
          Length = 951

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GKS+GT
Sbjct: 904 GKSYGT 909
>XP_005274116
          Length = 1602

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    GKSFGT 7
            GKS+GT
Sbjct: 1555 GKSYGT 1560
>XP_006718652
          Length = 2196

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    GKSFGT 7
            GKS+GT
Sbjct: 2149 GKSYGT 2154
>XP_005274115
          Length = 2222

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    GKSFGT 7
            GKS+GT
Sbjct: 2175 GKSYGT 2180
>XP_005274114
          Length = 2223

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    GKSFGT 7
            GKS+GT
Sbjct: 2176 GKSYGT 2181
>XP_005246055
          Length = 1481

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 195 GKAFGT 200
>XP_006710943
          Length = 1517

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 195 GKAFGT 200
>XP_006710942
          Length = 1517

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 195 GKAFGT 200
>XP_006710941
          Length = 1517

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 195 GKAFGT 200
>XP_005246054
          Length = 1517

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 195 GKAFGT 200
>XP_005246053
          Length = 1644

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 322 GKAFGT 327
>XP_006710940
          Length = 1682

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 396 GKAFGT 401
>XP_005246052
          Length = 1692

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 406 GKAFGT 411
>XP_005246051
          Length = 1717

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 395 GKAFGT 400
>XP_005246050
          Length = 1718

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 396 GKAFGT 401
>XP_005246049
          Length = 1728

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           GK+FGT
Sbjct: 406 GKAFGT 411
>NP_036270
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   IGKSFGTSE 9
           +GK FG  E
Sbjct: 381 LGKGFGAFE 389
>NP_001274278
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 389 GKAFGLSK 396
>NP_001243208
          Length = 566

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 409 GKAFGRKE 416
>NP_062537
          Length = 533

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 376 GKAFGRKE 383
>NP_001243209
          Length = 501

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 344 GKAFGRKE 351
>NP_056276
          Length = 1311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           G+SFGT
Sbjct: 789 GESFGT 794
>NP_006626
          Length = 562

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 202 GKAFGKSK 209
>NP_997200
          Length = 364

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   GKSFGT 7
           GK FGT
Sbjct: 228 GKEFGT 233
>NP_060506
          Length = 2078

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2    GKSFGT 7
            GK FGT
Sbjct: 1562 GKDFGT 1567
>NP_061121
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 613 GKAFGLSK 620
>NP_001275519
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 613 GKAFGLSK 620
>XP_005258479
          Length = 521

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 161 GKAFGKSK 168
>XP_006723039
          Length = 562

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 202 GKAFGKSK 209
>XP_005258298
          Length = 1091

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           G+SFGT
Sbjct: 569 GESFGT 574
>XP_006722500
          Length = 1218

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           G+SFGT
Sbjct: 789 GESFGT 794
>XP_006722499
          Length = 1310

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GKSFGT 7
           G+SFGT
Sbjct: 789 GESFGT 794
>XP_006719809
          Length = 513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 356 GKAFGRKE 363
>XP_005266240
          Length = 513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 356 GKAFGRKE 363
>XP_005266239
          Length = 513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 356 GKAFGRKE 363
>XP_006719808
          Length = 513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 356 GKAFGRKE 363
>XP_006719807
          Length = 513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GKSFGTSE 9
           GK+FG  E
Sbjct: 356 GKAFGRKE 363
>XP_005265380
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GKSFGTSE 9
           GK+FG S+
Sbjct: 612 GKAFGLSK 619
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.304    0.129    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 663,067
Number of extensions: 1952
Number of successful extensions: 104
Number of sequences better than 10000.0: 101
Number of HSP's gapped: 104
Number of HSP's successfully gapped: 104
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.3 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package