Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 299 NP_000523 17 2528 NP_001182058 17 2528 NP_001171485 17 2528 NP_001008781 17 2528 XP_006718827 17 2528 XP_005247565 17 2528 NP_005252 17 3301 NP_001157710 17 3301 NP_859053 17 3301 NP_004371 17 4312 NP_001073315 17 4312 NP_079330 17 4312 NP_055707 17 4312 NP_001273128 17 4312 NP_001273123 17 4312 NP_001273118 17 4312 NP_001273117 17 4312 XP_005255182 17 4312 XP_006720911 17 4312 XP_005255181 17 4312 NP_001265209 16 5631 NP_060916 16 5631 NP_001265210 16 5631 NP_690909 16 5631 NP_001010983 16 5631 XP_006713323 16 5631 NP_001139188 16 7355 NP_001139189 16 7355 NP_775947 16 7355 NP_001265514 16 7355 NP_001265515 16 7355 NP_006578 16 7355 NP_073740 16 7355 NP_001180268 16 7355 NP_001121697 16 7355 NP_066387 16 7355 NP_997227 16 7355 NP_061893 16 7355 NP_001191740 16 7355 NP_001180269 16 7355 NP_001011554 16 7355 NP_001180271 16 7355 NP_001092688 16 7355 NP_054780 16 7355 XP_006721758 16 7355 XP_005257109 16 7355 XP_005257107 16 7355 XP_006721757 16 7355 XP_005257106 16 7355 XP_005262682 16 7355 NP_066997 15 9605 NP_056099 15 9605 NP_116764 15 9605 NP_116765 15 9605 NP_570824 15 9605 NP_008988 15 9605 NP_001713 15 9605 NP_001164209 15 9605 NP_001005413 15 9605 NP_127490 15 9605 NP_003072 15 9605 XP_006723677 15 9605 XP_005260867 15 9605 XP_005260865 15 9605 XP_005269520 15 9605 XP_006711698 15 9605 XP_006710565 15 9605 XP_006710564 15 9605 XP_005270743 15 9605 NP_001013694 15 9605 NP_056047 15 9605 NP_004109 15 9605>NP_002430 Length = 1137 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGIVGMQPA 9 IGIVG+QPA Sbjct: 388 IGIVGVQPA 396>NP_000523 Length = 539 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IGIVGMQP 8 +GIVG QP Sbjct: 352 VGIVGNQP 359>NP_001182058 Length = 603 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GIVGMQPA 9 G+VG++PA Sbjct: 538 GLVGLEPA 545>NP_001171485 Length = 559 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IGIVGMQP 8 +GIVG QP Sbjct: 372 VGIVGNQP 379>NP_001008781 Length = 4557 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGIVGMQPA 9 +G+V +QPA Sbjct: 1381 VGVVSVQPA 1389>XP_006718827 Length = 3479 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGIVGMQPA 9 +G+V +QPA Sbjct: 271 VGVVSVQPA 279>XP_005247565 Length = 447 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IGIVGMQP 8 +GIVG QP Sbjct: 352 VGIVGNQP 359>NP_005252 Length = 296 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 G VGMQP Sbjct: 11 GTVGMQP 17>NP_001157710 Length = 256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGIVGMQPA 9 +GI+GMQ A Sbjct: 225 LGILGMQEA 233>NP_859053 Length = 296 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 G VGMQP Sbjct: 11 GTVGMQP 17>NP_004371 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 GI+G QPA Sbjct: 677 GILGNQPA 684>NP_001073315 Length = 2404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 GI+G QPA Sbjct: 639 GILGNQPA 646>NP_079330 Length = 1222 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G++G+QP Sbjct: 444 GVIGVQP 450>NP_055707 Length = 1271 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G+VG+QP Sbjct: 881 GLVGVQP 887Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 GI+G+QP Sbjct: 853 GILGIQP 859>NP_001273128 Length = 1271 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G+VG+QP Sbjct: 881 GLVGVQP 887Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 GI+G+QP Sbjct: 853 GILGIQP 859>NP_001273123 Length = 1316 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G+VG+QP Sbjct: 926 GLVGVQP 932Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 GI+G+QP Sbjct: 898 GILGIQP 904>NP_001273118 Length = 1337 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G+VG+QP Sbjct: 947 GLVGVQP 953Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 GI+G+QP Sbjct: 919 GILGIQP 925>NP_001273117 Length = 1349 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G+VG+QP Sbjct: 959 GLVGVQP 965Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 GI+G+QP Sbjct: 931 GILGIQP 937>XP_005255182 Length = 2303 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 GI+G QPA Sbjct: 677 GILGNQPA 684>XP_006720911 Length = 2355 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 GI+G QPA Sbjct: 677 GILGNQPA 684>XP_005255181 Length = 2427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 GI+G QPA Sbjct: 677 GILGNQPA 684>NP_001265209 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GIVG QP Sbjct: 41 GIVGPQP 47>NP_060916 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GIVG QP Sbjct: 41 GIVGPQP 47>NP_001265210 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GIVG QP Sbjct: 41 GIVGPQP 47>NP_690909 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GIVG QP Sbjct: 41 GIVGPQP 47>NP_001010983 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GIVG QP Sbjct: 41 GIVGPQP 47>XP_006713323 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GIVG QP Sbjct: 41 GIVGPQP 47>NP_001139188 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GIVGMQP 8 G GMQP Sbjct: 88 GFTGMQP 94>NP_001139189 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GIVGMQP 8 G GMQP Sbjct: 174 GFTGMQP 180>NP_775947 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GIVGMQP 8 G GMQP Sbjct: 79 GFTGMQP 85>NP_001265514 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 +GIVG+Q Sbjct: 440 LGIVGLQ 446>NP_001265515 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 +GIVG+Q Sbjct: 507 LGIVGLQ 513>NP_006578 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 +GIVG+Q Sbjct: 544 LGIVGLQ 550>NP_073740 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVGMQPA 9 +VG+QPA Sbjct: 119 LVGVQPA 125>NP_001180268 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVGMQPA 9 +VG+QPA Sbjct: 119 LVGVQPA 125>NP_001121697 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+VG PA Sbjct: 305 GVVGCSPA 312>NP_066387 Length = 124 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGIVGMQPA 9 +G+VG+Q A Sbjct: 23 LGLVGVQAA 31>NP_997227 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GIVGMQP 8 G+VG++P Sbjct: 55 GLVGLEP 61>NP_061893 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGIVGMQPA 9 +G+ G QPA Sbjct: 168 LGVDGAQPA 176>NP_001191740 Length = 124 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGIVGMQPA 9 +G+VG+Q A Sbjct: 23 LGLVGVQAA 31>NP_001180269 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVGMQPA 9 +VG+QPA Sbjct: 72 LVGVQPA 78>NP_001011554 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVGMQPA 9 +VG+QPA Sbjct: 72 LVGVQPA 78>NP_001180271 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVGMQPA 9 +VG+QPA Sbjct: 21 LVGVQPA 27>NP_001092688 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 IGI+G+Q Sbjct: 542 IGIIGIQ 548>NP_054780 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGIVGMQP 8 +G +GMQP Sbjct: 115 LGKLGMQP 122>XP_006721758 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGIVGMQPA 9 +G+ G QPA Sbjct: 168 LGVDGAQPA 176>XP_005257109 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGIVGMQPA 9 +G+ G QPA Sbjct: 168 LGVDGAQPA 176>XP_005257107 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGIVGMQPA 9 +G+ G QPA Sbjct: 168 LGVDGAQPA 176>XP_006721757 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGIVGMQPA 9 +G+ G QPA Sbjct: 168 LGVDGAQPA 176>XP_005257106 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGIVGMQPA 9 +G+ G QPA Sbjct: 168 LGVDGAQPA 176>XP_005262682 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 IGI+G+Q Sbjct: 533 IGIIGIQ 539>NP_066997 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIVGMQP 8 GI+G QP Sbjct: 140 GILGAQP 146>NP_056099 Length = 3375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IVGMQP 8 +VGMQP Sbjct: 1196 MVGMQP 1201>NP_116764 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 IGIVGMQP 8 +G+ GM P Sbjct: 27 LGVCGMHP 34>NP_116765 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 IGIVGMQP 8 +G+ GM P Sbjct: 27 LGVCGMHP 34>NP_570824 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+V QPA Sbjct: 111 GVVASQPA 118>NP_008988 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGMQPA 9 VG+QPA Sbjct: 266 VGLQPA 271>NP_001713 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 G++G +PA Sbjct: 25 GLIGRRPA 32>NP_001164209 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 +G++GMQ Sbjct: 923 VGLLGMQ 929>NP_001005413 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGMQPA 9 VG+QPA Sbjct: 219 VGLQPA 224>NP_127490 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGMQPA 9 VG+QPA Sbjct: 266 VGLQPA 271>NP_003072 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+V QPA Sbjct: 111 GVVASQPA 118>XP_006723677 Length = 136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+V QPA Sbjct: 111 GVVASQPA 118>XP_005260867 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+V QPA Sbjct: 111 GVVASQPA 118>XP_005260865 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+V QPA Sbjct: 111 GVVASQPA 118>XP_005269520 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGMQPA 9 VG+QPA Sbjct: 266 VGLQPA 271>XP_006711698 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 G VG++PA Sbjct: 819 GAVGVRPA 826>XP_006710565 Length = 3140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IVGMQP 8 +VGMQP Sbjct: 961 MVGMQP 966>XP_006710564 Length = 3432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IVGMQP 8 +VGMQP Sbjct: 1253 MVGMQP 1258>XP_005270743 Length = 3453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IVGMQP 8 +VGMQP Sbjct: 1274 MVGMQP 1279>NP_001013694 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIVGMQPA 9 G VG+QP+ Sbjct: 27 GRVGLQPS 34>NP_056047 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGIVGMQ 7 +G++GMQ Sbjct: 620 VGLLGMQ 626>NP_004109 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIVGMQPA 9 G+VG PA Sbjct: 168 GLVGAMPA 175Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.148 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 697,856 Number of extensions: 1647 Number of successful extensions: 78 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |