Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 18 1135 XP_006713721 18 1135 NP_003045 18 1482 NP_062818 17 4312 NP_001136277 16 5631 NP_005620 16 5631 NP_722580 16 5631 XP_006710057 16 5631 NP_898871 16 7355 NP_000047 16 7355 NP_001138762 16 7355 NP_938018 16 7355 NP_001093591 16 7355 NP_001093590 16 7355 XP_006715605 16 7355 XP_005248813 16 7355 NP_001032401 16 7355 NP_055508 16 7355 NP_004516 15 9605 NP_116191 15 9605 NP_001264044 15 9605 NP_009162 15 9605 NP_003033 15 9605 NP_001010898 15 9605 XP_005254779 15 9605 XP_006713369 15 9605 XP_005265468 15 9605 XP_005265467 15 9605 XP_006712591 15 9605 XP_006712590 15 9605 XP_006712589 15 9605 XP_006710706 15 9605 NP_001185498 15 9605 NP_001685 15 9605>NP_006209 Length = 1068 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IGFAIGMLV 9 IGFAIGM V Sbjct: 117 IGFAIGMPV 125>XP_006713721 Length = 1068 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IGFAIGMLV 9 IGFAIGM V Sbjct: 117 IGFAIGMPV 125>NP_003045 Length = 514 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IGFAIGML 8 +GFAIGM+ Sbjct: 391 VGFAIGMV 398>NP_062818 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IGFAIGML 8 IGFA+G L Sbjct: 222 IGFALGSL 229>NP_001136277 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +GFA+G+ Sbjct: 66 VGFAVGL 72>NP_005620 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +GFA+G+ Sbjct: 66 VGFAVGL 72>NP_722580 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IGFAIG 6 IGFAIG Sbjct: 517 IGFAIG 522>XP_006710057 Length = 99 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +GFA+G+ Sbjct: 8 VGFAVGL 14>NP_898871 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 130 VGFGIGIAV 138>NP_000047 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 130 VGFGIGIAV 138>NP_001138762 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 I +AIGM + Sbjct: 96 IAYAIGMFI 104>NP_938018 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 I +AIGM + Sbjct: 96 IAYAIGMFI 104>NP_001093591 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGFAIGML 8 +GFA+G L Sbjct: 438 LGFALGSL 445>NP_001093590 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGFAIGML 8 +GFA+G L Sbjct: 484 LGFALGSL 491>XP_006715605 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 60 VGFGIGIAV 68>XP_005248813 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 130 VGFGIGIAV 138>NP_001032401 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGFAIGML 8 +GFA+G L Sbjct: 409 LGFALGSL 416>NP_055508 Length = 883 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGFAIGML 8 +GFA+G L Sbjct: 556 LGFALGSL 563>NP_004516 Length = 4655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 1870 VGFPIGITV 1878>NP_116191 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IGFAIGMLV 9 + +AIGM++ Sbjct: 442 VAYAIGMIL 450>NP_001264044 Length = 4516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IGFAIGMLV 9 +G A+GM+V Sbjct: 1906 LGRALGMMV 1914>NP_009162 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 IG+A+G+ Sbjct: 50 IGYAVGL 56>NP_003033 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +G+AIG+ Sbjct: 58 VGYAIGL 64>NP_001010898 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 IGF++G+ Sbjct: 74 IGFSVGL 80>XP_005254779 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IGFAIGMLV 9 + +AIGM++ Sbjct: 460 VAYAIGMIL 468>XP_006713369 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +G+AIG+ Sbjct: 58 VGYAIGL 64>XP_005265468 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +G+AIG+ Sbjct: 58 VGYAIGL 64>XP_005265467 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 +G+AIG+ Sbjct: 58 VGYAIGL 64>XP_006712591 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 1875 VGFPIGITV 1883>XP_006712590 Length = 3897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 1112 VGFPIGITV 1120>XP_006712589 Length = 4660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGFAIGMLV 9 +GF IG+ V Sbjct: 1875 VGFPIGITV 1883>XP_006710706 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IGFAIGM 7 IGF++G+ Sbjct: 74 IGFSVGL 80>NP_001185498 Length = 155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GFAIGML 8 GFAIG++ Sbjct: 107 GFAIGIV 113>NP_001685 Length = 155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GFAIGML 8 GFAIG++ Sbjct: 107 GFAIGIV 113Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.166 0.483 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,392 Number of extensions: 548 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |