Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185763 21 229 NP_055459 21 229 XP_006711718 21 229 XP_006711716 21 229 XP_006711715 21 229 XP_006711714 21 229 XP_006711713 21 229 XP_006711712 21 229 XP_006711710 21 229 XP_006711709 21 229 XP_005277503 21 229 XP_005273038 21 229 XP_006711708 21 229 XP_005277500 21 229 XP_006711707 21 229 XP_005277499 21 229 XP_006711706 21 229 XP_006711705 21 229 XP_006710142 21 229 XP_006710141 21 229 NP_001124468 18 1935 NP_000850 18 1935 NP_003493 17 3301 NP_851393 17 3301 XP_005255667 17 3301 XP_005255666 17 3301 XP_005255665 17 3301 XP_005255664 17 3301 NP_001449 16 5631 NP_001120959 16 5631 NP_001026881 16 5631 NP_001128625 16 5631 NP_036307 16 5631 NP_208385 16 5631 XP_005252908 16 5631 XP_005273523 16 5631 XP_006716387 16 5631 XP_005273522 16 5631 XP_005273521 16 5631 XP_005273520 16 5631 XP_006716386 16 5631 XP_006715973 16 5631 XP_006714955 16 5631 NP_001121903 16 5631 NP_001128626 16 5631 NP_056174 16 5631 NP_004604 15 9605 NP_000405 15 9605 NP_001186221 15 9605 NP_001186220 15 9605 XP_005268801 15 9605 XP_005268800 15 9605 XP_005268799 15 9605 NP_056090 15 9605>NP_001185763 Length = 2362 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1181 LGATFTVDA 1189>NP_055459 Length = 2346 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1181 LGATFTVDA 1189>XP_006711718 Length = 1436 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 188 LGATFTVDA 196>XP_006711716 Length = 2411 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1247 LGATFTVDA 1255>XP_006711715 Length = 2428 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1181 LGATFTVDA 1189>XP_006711714 Length = 2429 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1181 LGATFTVDA 1189>XP_006711713 Length = 2432 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1184 LGATFTVDA 1192>XP_006711712 Length = 2473 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_006711710 Length = 2494 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1247 LGATFTVDA 1255>XP_006711709 Length = 2495 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1247 LGATFTVDA 1255>XP_005277503 Length = 2498 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_005273038 Length = 2509 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_006711708 Length = 2512 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_005277500 Length = 2525 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_006711707 Length = 2553 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_005277499 Length = 2561 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_006711706 Length = 2591 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_006711705 Length = 2592 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 1344 LGATFTVDA 1352>XP_006710142 Length = 671 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 133 LGATFTVDA 141>XP_006710141 Length = 672 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGATFTVDA 9 +GATFTVDA Sbjct: 133 LGATFTVDA 141>NP_001124468 Length = 835 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +G TFT+DA Sbjct: 164 LGPTFTLDA 172>NP_000850 Length = 888 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +G TFT+DA Sbjct: 164 LGPTFTLDA 172>NP_003493 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +GA+FT DA Sbjct: 12 LGASFTEDA 20>NP_851393 Length = 826 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +GA+FT DA Sbjct: 12 LGASFTEDA 20>XP_005255667 Length = 473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +GA+FT DA Sbjct: 61 LGASFTEDA 69>XP_005255666 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +GA+FT DA Sbjct: 12 LGASFTEDA 20>XP_005255665 Length = 875 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +GA+FT DA Sbjct: 61 LGASFTEDA 69>XP_005255664 Length = 911 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IGATFTVDA 9 +GA+FT DA Sbjct: 61 LGASFTEDA 69>NP_001449 Length = 2725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATFTVD 8 ATFTVD Sbjct: 1174 ATFTVD 1179>NP_001120959 Length = 2692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATFTVD 8 ATFTVD Sbjct: 1174 ATFTVD 1179>NP_001026881 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IGATFTV 7 IG TFTV Sbjct: 260 IGGTFTV 266>NP_001128625 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>NP_036307 Length = 471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IGATFT 6 IGATFT Sbjct: 241 IGATFT 246>NP_208385 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IGATFT 6 IGATFT Sbjct: 241 IGATFT 246>XP_005252908 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IGATFT 6 IGATFT Sbjct: 236 IGATFT 241>XP_005273523 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>XP_006716387 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>XP_005273522 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>XP_005273521 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 365 IGASFTV 371>XP_005273520 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 365 IGASFTV 371>XP_006716386 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 365 IGASFTV 371>XP_006715973 Length = 2632 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATFTVD 8 ATFTVD Sbjct: 1081 ATFTVD 1086>XP_006714955 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IGATFTV 7 IG TFTV Sbjct: 168 IGGTFTV 174>NP_001121903 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>NP_001128626 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>NP_056174 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IGATFTV 7 IGA+FTV Sbjct: 355 IGASFTV 361>NP_004604 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GATFTVD 8 G TFTV+ Sbjct: 619 GCTFTVE 625>NP_000405 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGATFTVD 8 IGA +T+D Sbjct: 660 IGAKWTID 667>NP_001186221 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGATFTVD 8 IGA +T+D Sbjct: 642 IGAKWTID 649>NP_001186220 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGATFTVD 8 IGA +T+D Sbjct: 685 IGAKWTID 692>XP_005268801 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IGATFTVD 8 IGA FT D Sbjct: 853 IGAAFTDD 860>XP_005268800 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IGATFTVD 8 IGA FT D Sbjct: 854 IGAAFTDD 861>XP_005268799 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IGATFTVD 8 IGA FT D Sbjct: 1042 IGAAFTDD 1049>NP_056090 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IGATFTVD 8 IGA FT D Sbjct: 1041 IGAAFTDD 1048Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.136 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,458 Number of extensions: 655 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |