Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_054784 18 1482 NP_001275879 18 1482 NP_002197 16 5631 NP_001138468 16 5631 XP_005255411 16 5631 XP_006721113 16 5631 XP_005268899 16 5631 XP_005268898 16 5631 XP_005268897 16 5631 XP_005268896 16 5631 NP_722516 16 5631 NP_001027563 16 5631 NP_057393 16 5631 NP_004124 16 7355 NP_001272971 16 7355 NP_001272973 16 7355 NP_001272972 16 7355 NP_000007 16 7355 NP_001120800 16 7355 NP_077734 16 7355 XP_006716509 16 7355 XP_005245325 16 7355 XP_005245324 16 7355 NP_056110 15 9605 NP_976076 15 9605 NP_000602 15 9605 NP_976074 15 9605 NP_001120695 15 9605 NP_001120698 15 9605 NP_001120699 15 9605 NP_976075 15 9605 NP_001120697 15 9605 NP_008930 15 9605 NP_001165276 15 9605 NP_001180354 15 9605 NP_001136010 15 9605 NP_001136008 15 9605 XP_005258159 15 9605 XP_006722384 15 9605 XP_006717566 15 9605 XP_006714501 15 9605 XP_005248293 15 9605 XP_005248291 15 9605 NP_060826 15 9605 NP_149092 15 9605 NP_001136009 15 9605 NP_001136007 15 9605 NP_078946 15 9605 NP_001180353 15 9605>NP_054784 Length = 679 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FGMLLVEN 9 FG+L+VEN Sbjct: 661 FGLLMVEN 668>NP_001275879 Length = 704 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FGMLLVEN 9 FG+L+VEN Sbjct: 686 FGLLMVEN 693>NP_002197 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 +FG LLVE Sbjct: 18 LFGSLLVE 25>NP_001138468 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005255411 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG +++EN Sbjct: 137 FGQIMIEN 144>XP_006721113 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG +++EN Sbjct: 214 FGQIMIEN 221>XP_005268899 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268898 Length = 1162 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268897 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268896 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 +FG LLVE Sbjct: 18 LFGSLLVE 25>NP_722516 Length = 1826 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IFGMLLVEN 9 +FG L+EN Sbjct: 1343 VFGKQLIEN 1351>NP_001027563 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG +++EN Sbjct: 182 FGQIMIEN 189>NP_057393 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG +++EN Sbjct: 237 FGQIMIEN 244>NP_004124 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IFGMLLVEN 9 +FGM+ ++N Sbjct: 348 LFGMVKIDN 356>NP_001272971 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG LLVE+ Sbjct: 273 FGKLLVEH 280>NP_001272973 Length = 232 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG LLVE+ Sbjct: 120 FGKLLVEH 127>NP_001272972 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG LLVE+ Sbjct: 342 FGKLLVEH 349>NP_000007 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG LLVE+ Sbjct: 309 FGKLLVEH 316>NP_001120800 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGMLLVEN 9 FG LLVE+ Sbjct: 313 FGKLLVEH 320>NP_077734 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFGML+ E Sbjct: 294 IFGMLIGE 301>XP_006716509 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IFGMLLVEN 9 +FGM+ ++N Sbjct: 235 LFGMVKIDN 243>XP_005245325 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFGML+ E Sbjct: 234 IFGMLIGE 241>XP_005245324 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFGML+ E Sbjct: 257 IFGMLIGE 264>NP_056110 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IFGMLL 6 +FGMLL Sbjct: 1826 VFGMLL 1831>NP_976076 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_000602 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_976074 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120695 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120698 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120699 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_976075 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120697 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFGMLLV 7 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_008930 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GMLLVE 8 GMLLVE Sbjct: 180 GMLLVE 185>NP_001165276 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GMLLVE 8 GMLLVE Sbjct: 180 GMLLVE 185>NP_001180354 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GMLLVEN 9 GM+ VEN Sbjct: 92 GMIFVEN 98>NP_001136010 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFG +LVE Sbjct: 110 IFGDILVE 117>NP_001136008 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFG +LVE Sbjct: 171 IFGDILVE 178>XP_005258159 Length = 1817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IFGMLL 6 +FGMLL Sbjct: 1638 VFGMLL 1643>XP_006722384 Length = 1877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IFGMLL 6 +FGMLL Sbjct: 1698 VFGMLL 1703>XP_006717566 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GMLLVEN 9 GM+ VEN Sbjct: 92 GMIFVEN 98>XP_006714501 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GMLLVE 8 GMLLVE Sbjct: 180 GMLLVE 185>XP_005248293 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GMLLVE 8 GMLLVE Sbjct: 137 GMLLVE 142>XP_005248291 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GMLLVE 8 GMLLVE Sbjct: 430 GMLLVE 435>NP_060826 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IFGMLLVEN 9 +FG L +EN Sbjct: 74 LFGELSIEN 82>NP_149092 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFG +LVE Sbjct: 171 IFGDILVE 178>NP_001136009 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFG +LVE Sbjct: 110 IFGDILVE 117>NP_001136007 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IFGMLLVE 8 IFG +LVE Sbjct: 172 IFGDILVE 179>NP_078946 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GMLLVEN 9 GM+ VEN Sbjct: 92 GMIFVEN 98>NP_001180353 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GMLLVEN 9 GM+ VEN Sbjct: 152 GMIFVEN 158Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.158 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,718 Number of extensions: 526 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |