Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_001137295 17 4312 NP_001230633 17 4312 NP_003400 17 4312 NP_001230631 17 4312 NP_056508 16 5631 NP_065930 16 5631 NP_001004477 16 5631 NP_002408 16 7355 NP_001139438 16 7355 NP_001277131 16 7355 NP_849191 16 7355 NP_001092105 16 7355 XP_006717927 16 7355 NP_001136277 15 9605 NP_005620 15 9605 NP_115495 15 9605 NP_001229342 15 9605 NP_005519 15 9605 NP_055043 15 9605 NP_005236 15 9605 NP_001020016 15 9605 NP_001139807 15 9605 NP_060527 15 9605 NP_877499 15 9605 NP_964012 15 9605 NP_008865 15 9605 NP_001248309 15 9605 NP_056240 15 9605 NP_006248 15 9605 NP_001269573 15 9605 XP_006718593 15 9605 XP_006718592 15 9605 XP_005252554 15 9605 XP_006717528 15 9605 XP_005252553 15 9605 XP_006714202 15 9605 XP_005262892 15 9605 XP_005262891 15 9605 XP_006712046 15 9605 XP_006710903 15 9605 XP_006710057 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 FFVELSET Sbjct: 1060 FFVELSET 1067>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 FFVELSET Sbjct: 1190 FFVELSET 1197>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 FFVELSET Sbjct: 888 FFVELSET 895>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 FFVELSET Sbjct: 888 FFVELSET 895>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 FFVELSET Sbjct: 1091 FFVELSET 1098>NP_001137295 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 FF+ +SET Sbjct: 3 FFISMSET 10>NP_001230633 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 FF+ +SET Sbjct: 3 FFISMSET 10>NP_003400 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 FF+ +SET Sbjct: 3 FFISMSET 10>NP_001230631 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 FF+ +SET Sbjct: 3 FFISMSET 10>NP_056508 Length = 942 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IFFVELSE 8 +F++ELSE Sbjct: 65 LFYLELSE 72>NP_065930 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FVELSET 9 FV+LSET Sbjct: 38 FVDLSET 44>NP_001004477 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 FF+ L+ET Sbjct: 169 FFISLTET 176>NP_002408 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FVELSET 9 F ELSET Sbjct: 2682 FTELSET 2688>NP_001139438 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FVELSET 9 F ELSET Sbjct: 2322 FTELSET 2328>NP_001277131 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFVELS 7 FFVELS Sbjct: 380 FFVELS 385>NP_849191 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFVELS 7 FFVELS Sbjct: 505 FFVELS 510>NP_001092105 Length = 993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFVELS 7 FFVELS Sbjct: 505 FFVELS 510>XP_006717927 Length = 2406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FVELSET 9 F ELSET Sbjct: 1832 FTELSET 1838>NP_001136277 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 IFF+E+S Sbjct: 105 IFFLEIS 111>NP_005620 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 IFF+E+S Sbjct: 105 IFFLEIS 111>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FFVELSE 8 FFVEL E Sbjct: 5464 FFVELYE 5470>NP_001229342 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 +F+E+S+T Sbjct: 121 YFLEMSDT 128>NP_005519 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVELSE 8 FVELSE Sbjct: 76 FVELSE 81>NP_055043 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 90 LFFLELS 96>NP_005236 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 + VELSET Sbjct: 1672 YSVELSET 1679>NP_001020016 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 80 LFFMELS 86>NP_001139807 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 7 LFFLELS 13>NP_060527 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 114 LFFLELS 120>NP_877499 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 114 LFFLELS 120>NP_964012 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 153 LFFMELS 159>NP_008865 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 99 LFFMELS 105>NP_001248309 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 84 LFFMELS 90>NP_056240 Length = 1720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IFFVELSET 9 I+F +SET Sbjct: 1154 IYFASVSET 1162>NP_006248 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 +F+E+S+T Sbjct: 121 YFLEMSDT 128>NP_001269573 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 +F+E+S+T Sbjct: 85 YFLEMSDT 92>XP_006718593 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVELSE 8 FVELSE Sbjct: 76 FVELSE 81>XP_006718592 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVELSE 8 FVELSE Sbjct: 76 FVELSE 81>XP_005252554 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 +F+E+S+T Sbjct: 155 YFLEMSDT 162>XP_006717528 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 +F+E+S+T Sbjct: 121 YFLEMSDT 128>XP_005252553 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FFVELSET 9 +F+E+S+T Sbjct: 155 YFLEMSDT 162>XP_006714202 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 + VELSET Sbjct: 1672 YSVELSET 1679>XP_005262892 Length = 4600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 + VELSET Sbjct: 1672 YSVELSET 1679>XP_005262891 Length = 4600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FFVELSET 9 + VELSET Sbjct: 1672 YSVELSET 1679>XP_006712046 Length = 1612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IFFVELSET 9 I+F +SET Sbjct: 1046 IYFASVSET 1054>XP_006710903 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 +FF+ELS Sbjct: 153 LFFMELS 159>XP_006710057 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFFVELS 7 IFF+E+S Sbjct: 47 IFFLEIS 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.146 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 333,853 Number of extensions: 339 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |