Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001108479 18 1935 NP_001108480 18 1935 NP_001275926 18 1935 NP_919258 18 1935 XP_005262809 18 1935 XP_006714144 18 1935 XP_005262807 18 1935 XP_005262806 18 1935 NP_775864 17 4312 NP_036466 16 7355 NP_872308 16 7355 XP_006714538 16 7355 NP_001157284 15 9605 NP_068602 15 9605 NP_002009 15 9605 NP_777360 15 9605 NP_002807 15 9605 NP_001243193 15 9605 NP_001243194 15 9605 XP_005256615 15 9605 XP_005256613 15 9605 XP_005256612 15 9605>NP_001108479 Length = 528 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 25 IFAKPINSK 33>NP_001108480 Length = 528 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 25 IFAKPINSK 33>NP_001275926 Length = 528 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 25 IFAKPINSK 33>NP_919258 Length = 749 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 246 IFAKPINSK 254>XP_005262809 Length = 546 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 43 IFAKPINSK 51>XP_006714144 Length = 749 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 246 IFAKPINSK 254>XP_005262807 Length = 749 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 246 IFAKPINSK 254>XP_005262806 Length = 767 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 IFAK INS+ Sbjct: 264 IFAKPINSK 272>NP_775864 Length = 998 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IFAKKINSR 9 +F KK+N R Sbjct: 676 VFLKKLNQR 684>NP_036466 Length = 2058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKINSR 9 KKINSR Sbjct: 415 KKINSR 420>NP_872308 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FAKKINSR 9 FAKK NS+ Sbjct: 227 FAKKNNSK 234>XP_006714538 Length = 2035 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKINSR 9 KKINSR Sbjct: 415 KKINSR 420>NP_001157284 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 +FA+K+N + Sbjct: 320 LFARKLNPK 328>NP_068602 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 +FA+K+N + Sbjct: 320 LFARKLNPK 328>NP_002009 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFAKKIN 7 +FA+KIN Sbjct: 674 LFAEKIN 680>NP_777360 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 I +KKIN++ Sbjct: 184 IISKKINTK 192>NP_002807 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IFAKKINSR 9 I +KKIN++ Sbjct: 204 IISKKINTK 212>NP_001243193 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFAKKIN 7 +FA+KIN Sbjct: 663 LFAEKIN 669>NP_001243194 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFAKKIN 7 +FA+KIN Sbjct: 619 LFAEKIN 625>XP_005256615 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFAKKIN 7 +FA+KIN Sbjct: 673 LFAEKIN 679>XP_005256613 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFAKKIN 7 +FA+KIN Sbjct: 673 LFAEKIN 679>XP_005256612 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IFAKKIN 7 +FA+KIN Sbjct: 674 LFAEKIN 680Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.137 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 335,294 Number of extensions: 448 Number of successful extensions: 22 Number of sequences better than 10000.0: 22 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 22 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |