Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443187 17 2528 NP_056525 17 3301 NP_001269346 17 4312 NP_001035915 17 4312 NP_689564 17 4312 NP_001257578 17 4312 NP_001257577 17 4312 XP_006721514 17 4312 XP_005256514 17 4312 XP_005249902 16 5631 NP_076972 16 5631 NP_055828 16 7355 NP_001009999 16 7355 NP_003669 16 7355 NP_001002878 16 7355 NP_001002879 16 7355 NP_001002877 16 7355 NP_000258 16 7355 NP_001035957 16 7355 NP_061060 16 7355 XP_005261858 16 7355 XP_005261857 16 7355 XP_005261856 16 7355 XP_006724410 16 7355 XP_005261855 16 7355 XP_005261854 16 7355 XP_006721990 16 7355 XP_006721989 16 7355 XP_005258041 16 7355 XP_006721988 16 7355 XP_006721987 16 7355 XP_006721986 16 7355 XP_005258040 16 7355 XP_006721985 16 7355 XP_006721513 16 7355 XP_006710537 16 7355 XP_006710536 16 7355 XP_006710535 16 7355 XP_005245843 16 7355 NP_000855 16 7355 NP_006327 15 9605 NP_848635 15 9605 NP_076982 15 9605 NP_001269619 15 9605 NP_001269617 15 9605 NP_001244965 15 9605 NP_060589 15 9605 NP_001244962 15 9605 XP_006726676 15 9605 XP_005276555 15 9605 XP_006721126 15 9605 XP_005252255 15 9605 XP_005252253 15 9605 XP_005252252 15 9605 XP_005252250 15 9605 XP_005251703 15 9605 XP_005251702 15 9605>NP_443187 Length = 710 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 DVYL SEI Sbjct: 149 DVYLPSEI 156>NP_056525 Length = 478 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 IDV LSSE+ Sbjct: 416 IDVQLSSEL 424>NP_001269346 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 53 VPIYISSEI 61>NP_001035915 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 109 VPIYISSEI 117>NP_689564 Length = 612 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 109 VPIYISSEI 117>NP_001257578 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 109 VPIYISSEI 117>NP_001257577 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 109 VPIYISSEI 117>XP_006721514 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 109 VPIYISSEI 117>XP_005256514 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSEI Sbjct: 109 VPIYISSEI 117>XP_005249902 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 +D+Y SS++ Sbjct: 24 LDIYFSSQL 32>NP_076972 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 +D+Y SS++ Sbjct: 24 LDIYFSSQL 32>NP_055828 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVYLSS 7 DVYLSS Sbjct: 518 DVYLSS 523>NP_001009999 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVYLSS 7 DVYLSS Sbjct: 542 DVYLSS 547>NP_003669 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 633 LDVYLETE 640>NP_001002878 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 633 LDVYLETE 640>NP_001002879 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 633 LDVYLETE 640>NP_001002877 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 633 LDVYLETE 640>NP_000258 Length = 2818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1760 DIYYASEI 1767>NP_001035957 Length = 2839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1781 DIYYASEI 1788>NP_061060 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +D+Y S+E Sbjct: 368 VDIYFSAE 375>XP_005261858 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 294 LDVYLETE 301>XP_005261857 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 360 LDVYLETE 367>XP_005261856 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 644 LDVYLETE 651>XP_006724410 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 644 LDVYLETE 651>XP_005261855 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 644 LDVYLETE 651>XP_005261854 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDVYLSSE 8 +DVYL +E Sbjct: 644 LDVYLETE 651>XP_006721990 Length = 2823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1791 DIYYASEI 1798>XP_006721989 Length = 2823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1791 DIYYASEI 1798>XP_005258041 Length = 2836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1760 DIYYASEI 1767>XP_006721988 Length = 2846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1770 DIYYASEI 1777>XP_006721987 Length = 2849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1791 DIYYASEI 1798>XP_006721986 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1778 DIYYASEI 1785>XP_005258040 Length = 2857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1781 DIYYASEI 1788>XP_006721985 Length = 2867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D+Y +SEI Sbjct: 1791 DIYYASEI 1798>XP_006721513 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IDVYLSSEI 9 + +Y+SSE+ Sbjct: 109 VPIYISSEL 117>XP_006710537 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVYLSS 7 DVYLSS Sbjct: 544 DVYLSS 549>XP_006710536 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVYLSS 7 DVYLSS Sbjct: 544 DVYLSS 549>XP_006710535 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVYLSS 7 DVYLSS Sbjct: 524 DVYLSS 529>XP_005245843 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVYLSS 7 DVYLSS Sbjct: 538 DVYLSS 543>NP_000855 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVYLSSEI 9 D++LSS+I Sbjct: 112 DIWLSSDI 119>NP_006327 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D++L SEI Sbjct: 39 DIFLPSEI 46>NP_848635 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DVYLSSE 8 D Y+SSE Sbjct: 278 DAYMSSE 284>NP_076982 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 80 YLSSEI 85>NP_001269619 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 12 YLSSEI 17>NP_001269617 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 80 YLSSEI 85>NP_001244965 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IDVYLSSEI 9 IDVYL+ + Sbjct: 13 IDVYLAKSL 21>NP_060589 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IDVYLSSEI 9 IDVYL+ + Sbjct: 13 IDVYLAKSL 21>NP_001244962 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IDVYLSSEI 9 IDVYL+ + Sbjct: 13 IDVYLAKSL 21>XP_006726676 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IDVYLSSEI 9 IDVYL+ + Sbjct: 13 IDVYLAKSL 21>XP_005276555 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IDVYLSSEI 9 IDVYL+ + Sbjct: 13 IDVYLAKSL 21>XP_006721126 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IDVYLSSEI 9 IDVYL+ + Sbjct: 13 IDVYLAKSL 21>XP_005252255 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 12 YLSSEI 17>XP_005252253 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 80 YLSSEI 85>XP_005252252 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 80 YLSSEI 85>XP_005252250 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLSSEI 9 YLSSEI Sbjct: 80 YLSSEI 85>XP_005251703 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D++L SEI Sbjct: 39 DIFLPSEI 46>XP_005251702 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVYLSSEI 9 D++L SEI Sbjct: 39 DIFLPSEI 46Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.139 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,355 Number of extensions: 510 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |