Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_006718908 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_066933 17 3301 NP_542376 17 3301 NP_004361 17 3301 XP_005251116 17 3301 XP_006716714 17 3301 XP_006715397 17 3301 XP_005249698 17 4312 NP_001129396 17 4312 NP_000050 16 5631 NP_536724 16 5631 NP_005397 16 7355 NP_003592 16 7355 NP_001127958 16 7355 NP_443174 16 7355 NP_001265874 16 7355 NP_060962 16 7355 NP_001161693 16 7355 XP_006716431 16 7355 XP_005246404 16 7355 NP_005530 16 7355 NP_001078956 15 9605 NP_663788 15 9605 NP_001106984 15 9605 NP_001106983 15 9605 NP_060517 15 9605 XP_006720023 15 9605 XP_005254148 15 9605 XP_005254146 15 9605 XP_006720020 15 9605 XP_005254144 15 9605 XP_006720019 15 9605 XP_005254143 15 9605 XP_005254142 15 9605 XP_005268536 15 9605 XP_006710377 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 2998 IDQSFNKV 3005>XP_006718908 Length = 1708 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 1650 IDQSFNKV 1657>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 2650 IDQSFNKV 2657>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 2992 IDQSFNKV 2999>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 2998 IDQSFNKV 3005>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 2998 IDQSFNKV 3005>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 IDQSFNKV 8 IDQSFNKV Sbjct: 2998 IDQSFNKV 3005>NP_066933 Length = 1796 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DQSFNKVV 9 D++FNK++ Sbjct: 1045 DENFNKII 1052>NP_542376 Length = 1899 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DQSFNKVV 9 D +FNKVV Sbjct: 1172 DDNFNKVV 1179>NP_004361 Length = 3063 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DQSFNKVV 9 D +FNKVV Sbjct: 2336 DDNFNKVV 2343>XP_005251116 Length = 1780 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DQSFNKVV 9 D++FNK++ Sbjct: 1045 DENFNKII 1052>XP_006716714 Length = 1796 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DQSFNKVV 9 D++FNK++ Sbjct: 1045 DENFNKII 1052>XP_006715397 Length = 2972 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DQSFNKVV 9 D +FNKVV Sbjct: 2245 DDNFNKVV 2252>XP_005249698 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQSFNKVV 9 IDQ+FN V Sbjct: 38 IDQNFNNYV 46>NP_001129396 Length = 1590 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQSFNKVV 9 IDQ+FN V Sbjct: 584 IDQNFNNYV 592>NP_000050 Length = 3418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 +SFNK+V Sbjct: 1441 ESFNKIV 1447>NP_536724 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QSFNKVV 9 Q FNKVV Sbjct: 100 QDFNKVV 106>NP_005397 Length = 1354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DQSFNKVV 9 +QSF KVV Sbjct: 1339 NQSFRKVV 1346>NP_003592 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IDQSFNKV 8 +DQ+ NK+ Sbjct: 638 VDQNLNKI 645>NP_001127958 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IDQSFNK 7 +DQSF K Sbjct: 374 VDQSFQK 380>NP_443174 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IDQSFNK 7 +DQSF K Sbjct: 374 VDQSFQK 380>NP_001265874 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IDQSFNKVV 9 +D+S+ KV+ Sbjct: 297 LDESYQKVI 305>NP_060962 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IDQSFNKVV 9 +D+S+ KV+ Sbjct: 286 LDESYQKVI 294>NP_001161693 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 +SFNK+V Sbjct: 1686 KSFNKIV 1692>XP_006716431 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IDQSFNKVV 9 +D+S+ KV+ Sbjct: 286 LDESYQKVI 294>XP_005246404 Length = 1821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 +SFNK+V Sbjct: 1687 KSFNKIV 1693>NP_005530 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IDQSFNKV 8 IDQ F KV Sbjct: 218 IDQRFEKV 225>NP_001078956 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DQSFNKVV 9 DQ FN+++ Sbjct: 313 DQKFNELI 320>NP_663788 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 95 QNFNKVL 101>NP_001106984 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 66 QNFNKVL 72>NP_001106983 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 116 QNFNKVL 122>NP_060517 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DQSFNKVV 9 ++SFNK++ Sbjct: 285 EKSFNKLI 292>XP_006720023 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005254148 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 13 QNFNKVL 19>XP_005254146 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 13 QNFNKVL 19>XP_006720020 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 19 QNFNKVL 25>XP_005254144 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_006720019 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005254143 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005254142 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSFNKVV 9 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005268536 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DQSFNKVV 9 ++SFNK++ Sbjct: 404 EKSFNKLI 411>XP_006710377 Length = 827 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DQSFNKVV 9 DQ FN+++ Sbjct: 313 DQKFNELI 320Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.136 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,050 Number of extensions: 700 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |