Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 665 XP_005273257 19 665 NP_115627 17 2528 XP_006718583 17 2528 XP_006718582 17 2528 NP_006273 16 5631 NP_060500 16 5631 NP_001229437 16 5631 NP_542164 16 5631 XP_005260590 16 5631 XP_006723933 16 5631 XP_005260589 16 5631 XP_005260588 16 5631 XP_005260587 16 5631 XP_006722446 16 5631 XP_006722445 16 5631 XP_006722444 16 5631 XP_006722443 16 5631 NP_065801 16 7355 NP_219493 16 7355 NP_001033043 16 7355 XP_005254804 16 7355 XP_006720791 16 7355 XP_005254803 16 7355 XP_005254800 16 7355 XP_005254799 16 7355 XP_005277785 16 7355 XP_005277784 16 7355 XP_005277783 16 7355 NP_003913 16 7355 NP_001138830 15 9605 NP_001138829 15 9605 NP_056292 15 9605 NP_065207 15 9605 NP_001258029 15 9605 NP_001129505 15 9605 NP_055096 15 9605 NP_008949 15 9605 NP_510965 15 9605 NP_001258028 15 9605 NP_001258026 15 9605 NP_001660 15 9605 NP_001258025 15 9605 NP_001258027 15 9605 XP_005274573 15 9605 XP_005274572 15 9605 XP_005274571 15 9605 XP_005258296 15 9605 XP_006720530 15 9605 XP_006720529 15 9605 XP_006720528 15 9605 XP_005268640 15 9605 XP_006717006 15 9605 XP_006717005 15 9605 XP_006717004 15 9605 XP_006717003 15 9605 XP_005251736 15 9605 NP_006829 15 9605>NP_064450 Length = 1722 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IDQAAEENS 9 IDQ AEENS Sbjct: 1622 IDQEAEENS 1630>XP_005273257 Length = 1726 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IDQAAEENS 9 IDQ AEENS Sbjct: 1626 IDQEAEENS 1634>NP_115627 Length = 1476 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ AEEN Sbjct: 412 VDQLAEEN 419>XP_006718583 Length = 1482 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ AEEN Sbjct: 334 VDQLAEEN 341>XP_006718582 Length = 1560 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ AEEN Sbjct: 412 VDQLAEEN 419>NP_006273 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQAAEENS 9 +DQ EENS Sbjct: 312 VDQDDEENS 320>NP_060500 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 373 IDQASEE 379>NP_001229437 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 504 IDQASEE 510>NP_542164 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 886 IDQASEE 892>XP_005260590 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQAAEENS 9 +DQ EENS Sbjct: 312 VDQDDEENS 320>XP_006723933 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQAAEENS 9 +DQ EENS Sbjct: 299 VDQDDEENS 307>XP_005260589 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQAAEENS 9 +DQ EENS Sbjct: 299 VDQDDEENS 307>XP_005260588 Length = 478 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQAAEENS 9 +DQ EENS Sbjct: 328 VDQDDEENS 336>XP_005260587 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IDQAAEENS 9 +DQ EENS Sbjct: 328 VDQDDEENS 336>XP_006722446 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 825 IDQASEE 831>XP_006722445 Length = 905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 841 IDQASEE 847>XP_006722444 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 850 IDQASEE 856>XP_006722443 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 IDQA+EE Sbjct: 861 IDQASEE 867>NP_065801 Length = 1204 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DQAAEEN 8 D+AA+EN Sbjct: 944 DEAADEN 950>NP_219493 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ+ EEN Sbjct: 132 LDQSMEEN 139>NP_001033043 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ+ EEN Sbjct: 343 LDQSMEEN 350>XP_005254804 Length = 4796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 IDQ AEE+ Sbjct: 2552 IDQQAEES 2559>XP_006720791 Length = 4853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 IDQ AEE+ Sbjct: 2609 IDQQAEES 2616>XP_005254803 Length = 4854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 IDQ AEE+ Sbjct: 2617 IDQQAEES 2624>XP_005254800 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 IDQ AEE+ Sbjct: 2617 IDQQAEES 2624>XP_005254799 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 IDQ AEE+ Sbjct: 2617 IDQQAEES 2624>XP_005277785 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ+ EEN Sbjct: 132 LDQSMEEN 139>XP_005277784 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ+ EEN Sbjct: 342 LDQSMEEN 349>XP_005277783 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 +DQ+ EEN Sbjct: 343 LDQSMEEN 350>NP_003913 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IDQAAEEN 8 IDQ AEE+ Sbjct: 2617 IDQQAEES 2624>NP_001138830 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DQAAEENS 9 +QA EEN+ Sbjct: 762 EQATEENA 769>NP_001138829 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DQAAEENS 9 +QA EEN+ Sbjct: 762 EQATEENA 769>NP_056292 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DQAAEENS 9 +QA EEN+ Sbjct: 762 EQATEENA 769>NP_065207 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDQAAEENS 9 +D+A EE+S Sbjct: 524 LDKATEEDS 532>NP_001258029 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 155 IDQLAEE 161>NP_001129505 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 172 IDQLAEE 178>NP_055096 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 198 IDQLAEE 204>NP_008949 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAEENS 9 AAEENS Sbjct: 1812 AAEENS 1817>NP_510965 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 215 IDQLAEE 221>NP_001258028 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 186 IDQLAEE 192>NP_001258026 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 169 IDQLAEE 175>NP_001660 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 69 IDQLAEE 75>NP_001258025 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 197 IDQLAEE 203>NP_001258027 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 214 IDQLAEE 220>XP_005274573 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 69 IDQLAEE 75>XP_005274572 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 69 IDQLAEE 75>XP_005274571 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IDQAAEE 7 IDQ AEE Sbjct: 69 IDQLAEE 75>XP_005258296 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IDQAAEENS 9 +D+A EE+S Sbjct: 524 LDKATEEDS 532>XP_006720530 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DQAAEENS 9 +QA EEN+ Sbjct: 762 EQATEENA 769>XP_006720529 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DQAAEENS 9 +QA EEN+ Sbjct: 762 EQATEENA 769>XP_006720528 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DQAAEENS 9 +QA EEN+ Sbjct: 762 EQATEENA 769>XP_005268640 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 +DQA+EE Sbjct: 157 LDQASEE 163>XP_006717006 Length = 1760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAEENS 9 AAEENS Sbjct: 1232 AAEENS 1237>XP_006717005 Length = 1788 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAEENS 9 AAEENS Sbjct: 1260 AAEENS 1265>XP_006717004 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAEENS 9 AAEENS Sbjct: 1812 AAEENS 1817>XP_006717003 Length = 2278 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAEENS 9 AAEENS Sbjct: 1812 AAEENS 1817>XP_005251736 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAEENS 9 AAEENS Sbjct: 1812 AAEENS 1817>NP_006829 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IDQAAEE 7 +DQA+EE Sbjct: 158 LDQASEE 164Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.284 0.105 0.239 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 496,344 Number of extensions: 894 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |