Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 21 175 XP_006717989 21 175 XP_006723595 17 2528 NP_002448 17 3301 NP_742066 17 3301 XP_005264197 17 3301 XP_006712004 17 3301 NP_150375 17 4312 NP_078886 17 4312 NP_775185 17 4312 XP_006726169 17 4312 XP_006726075 17 4312 XP_006725982 17 4312 XP_006725773 17 4312 XP_006725559 17 4312 XP_006715227 17 4312 XP_005247818 17 4312 NP_078934 16 5631 NP_085128 16 5631 NP_001120680 16 5631 NP_085139 16 5631 XP_006714305 16 5631 XP_005263139 16 5631 NP_001155155 16 7355 NP_733764 16 7355 NP_653273 16 7355 NP_683513 16 7355 XP_005252487 16 7355 XP_005248382 16 7355 NP_055931 15 9605 NP_001157683 15 9605 NP_064716 15 9605 NP_001157685 15 9605 NP_001093869 15 9605 NP_001093870 15 9605 NP_008824 15 9605 NP_006705 15 9605 NP_001273067 15 9605 NP_064450 15 9605 XP_005251505 15 9605 XP_005248794 15 9605 XP_005248793 15 9605 XP_005248792 15 9605 XP_005266859 15 9605 XP_005266858 15 9605 XP_005266855 15 9605 XP_005266854 15 9605 XP_005262709 15 9605 XP_005273257 15 9605 XP_006711259 15 9605 XP_005277566 15 9605 NP_001010887 15 9605>NP_000305 Length = 403 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ICSIKRADN 9 ICSI+RADN Sbjct: 303 ICSIERADN 311>XP_006717989 Length = 388 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ICSIKRADN 9 ICSI+RADN Sbjct: 288 ICSIERADN 296>XP_006723595 Length = 678 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ICSIKRADN 9 +C +K ADN Sbjct: 526 VCRVKPADN 534>NP_002448 Length = 5179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C IKR DN Sbjct: 4995 CIIKRPDN 5002>NP_742066 Length = 1493 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 CSI R DN Sbjct: 755 CSILRGDN 762>XP_005264197 Length = 786 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 CSI R DN Sbjct: 755 CSILRGDN 762>XP_006712004 Length = 1488 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 CSI R DN Sbjct: 750 CSILRGDN 757>NP_150375 Length = 1196 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ICSIKRADN 9 +CSI+RA + Sbjct: 267 LCSIRRASS 275>NP_078886 Length = 488 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ICSIKRADN 9 +C++K A+N Sbjct: 292 VCALKTAEN 300>NP_775185 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ICSIKRADN 9 +CSI+RA + Sbjct: 267 LCSIRRASS 275>XP_006726169 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C +KRA N Sbjct: 388 CDVKRAGN 395>XP_006726075 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C +KRA N Sbjct: 388 CDVKRAGN 395>XP_006725982 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C +KRA N Sbjct: 388 CDVKRAGN 395>XP_006725773 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C +KRA N Sbjct: 388 CDVKRAGN 395>XP_006725559 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C +KRA N Sbjct: 388 CDVKRAGN 395>XP_006715227 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C +KRA N Sbjct: 388 CDVKRAGN 395>XP_005247818 Length = 460 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ICSIKRADN 9 +C++K A+N Sbjct: 264 VCALKTAEN 272>NP_078934 Length = 1081 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ICSIKRADN 9 ICS+ ADN Sbjct: 1026 ICSLILADN 1034>NP_085128 Length = 2136 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICSIKRADN 9 +C++ R DN Sbjct: 1685 VCTLTREDN 1693>NP_001120680 Length = 2002 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICSIKRADN 9 +C++ R DN Sbjct: 1395 VCTLTREDN 1403>NP_085139 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 CSIKRADN 9 CS+++A+N Sbjct: 271 CSVEKANN 278>XP_006714305 Length = 1902 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICSIKRADN 9 +C++ R DN Sbjct: 1295 VCTLTREDN 1303>XP_005263139 Length = 2002 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICSIKRADN 9 +C++ R DN Sbjct: 1395 VCTLTREDN 1403>NP_001155155 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 CS+KR D Sbjct: 384 CSMKRKD 390>NP_733764 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 CS+KR D Sbjct: 139 CSMKRKD 145>NP_653273 Length = 1139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 CS+KR D Sbjct: 463 CSMKRKD 469>NP_683513 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ICSIKRAD 8 +C I+RAD Sbjct: 48 MCRIQRAD 55>XP_005252487 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ICSIKRAD 8 IC +RAD Sbjct: 7 ICKTRRAD 14>XP_005248382 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ICSIKRAD 8 +C I+RAD Sbjct: 48 MCRIQRAD 55>NP_055931 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C IK AD+ Sbjct: 292 CQIKTADS 299>NP_001157683 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C IK AD+ Sbjct: 292 CQIKTADS 299>NP_064716 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ICSIKRAD 8 IC++ R+D Sbjct: 310 ICTVMRSD 317>NP_001157685 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSIKRADN 9 C IK AD+ Sbjct: 292 CQIKTADS 299>NP_001093869 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 CS K+AD Sbjct: 581 CSCKQAD 587>NP_001093870 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 CS K+AD Sbjct: 581 CSCKQAD 587>NP_008824 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 C +K+AD Sbjct: 278 CRVKKAD 284>NP_006705 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 IC+I DN Sbjct: 429 ICAIMNLDN 437>NP_001273067 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 IC+I DN Sbjct: 298 ICAIMNLDN 306>NP_064450 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ICSIKR 6 ICSI+R Sbjct: 1464 ICSIRR 1469>XP_005251505 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 I +KR DN Sbjct: 114 IAELKRCDN 122>XP_005248794 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ICSIKRAD 8 IC++ R+D Sbjct: 135 ICTVMRSD 142>XP_005248793 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ICSIKRAD 8 IC++ R+D Sbjct: 135 ICTVMRSD 142>XP_005248792 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ICSIKRAD 8 IC++ R+D Sbjct: 135 ICTVMRSD 142>XP_005266859 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 IC+I DN Sbjct: 209 ICAIMNLDN 217>XP_005266858 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 IC+I DN Sbjct: 211 ICAIMNLDN 219>XP_005266855 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 IC+I DN Sbjct: 340 ICAIMNLDN 348>XP_005266854 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 IC+I DN Sbjct: 403 ICAIMNLDN 411>XP_005262709 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 CS K+AD Sbjct: 581 CSCKQAD 587>XP_005273257 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ICSIKR 6 ICSI+R Sbjct: 1468 ICSIRR 1473>XP_006711259 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 C +K+AD Sbjct: 128 CRVKKAD 134>XP_005277566 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CSIKRAD 8 C +K+AD Sbjct: 278 CRVKKAD 284>NP_001010887 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ICSIKRADN 9 I +KR DN Sbjct: 163 IAELKRCDN 171Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.135 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 620,215 Number of extensions: 1438 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |