Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 390 NP_001171601 18 1135 NP_001954 18 1135 NP_001171602 18 1135 XP_005262857 18 1135 XP_005262856 18 1135 XP_006714188 18 1135 XP_006714187 18 1135 XP_005262855 18 1135 XP_005262854 18 1135 XP_005262853 18 1135 NP_055786 17 4312 NP_001120650 17 4312 NP_001275980 17 4312 NP_060203 17 4312 NP_001275981 17 4312 XP_006713955 17 4312 XP_005272341 17 4312 XP_005272340 17 4312 NP_001035304 16 5631 NP_699186 16 5631 XP_005266891 16 5631 XP_005266890 16 5631 NP_055994 16 7355 NP_001138586 16 7355 NP_054786 16 7355 NP_114141 16 7355 NP_001271266 16 7355 XP_005273996 16 7355 NP_001139669 16 7355 NP_000227 15 9605 NP_937762 15 9605 NP_008835 15 9605 NP_001075109 15 9605 NP_001121190 15 9605 NP_000218 15 9605 NP_001121189 15 9605 XP_006720564 15 9605 XP_005254429 15 9605 XP_005276064 15 9605>NP_000312 Length = 928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ICIFIEAVD 9 ICIFI AVD Sbjct: 101 ICIFIAAVD 109>NP_001171601 Length = 1166 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 948 VCMYIEALD 956>NP_001954 Length = 1207 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 989 VCMYIEALD 997>NP_001171602 Length = 1165 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 947 VCMYIEALD 955>XP_005262857 Length = 1052 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 908 VCMYIEALD 916>XP_005262856 Length = 1061 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 989 VCMYIEALD 997>XP_006714188 Length = 1132 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 906 VCMYIEALD 914>XP_006714187 Length = 1133 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 989 VCMYIEALD 997>XP_005262855 Length = 1134 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 908 VCMYIEALD 916>XP_005262854 Length = 1173 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 947 VCMYIEALD 955>XP_005262853 Length = 1215 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ICIFIEAVD 9 +C++IEA+D Sbjct: 989 VCMYIEALD 997>NP_055786 Length = 817 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ICIFIEAVD 9 +CI +EA+D Sbjct: 73 VCIAMEALD 81>NP_001120650 Length = 983 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 968 VCVFFTAMD 976>NP_001275980 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 879 VCVFFTAMD 887>NP_060203 Length = 975 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 960 VCVFFTAMD 968>NP_001275981 Length = 850 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 835 VCVFFTAMD 843>XP_006713955 Length = 861 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 846 VCVFFTAMD 854>XP_005272341 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 879 VCVFFTAMD 887>XP_005272340 Length = 913 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 +C+F A+D Sbjct: 898 VCVFFTAMD 906>NP_001035304 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 IC ++EA D Sbjct: 80 ICFYLEAGD 88>NP_699186 Length = 141 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 IC ++EA D Sbjct: 80 ICFYLEAGD 88>XP_005266891 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 IC ++EA D Sbjct: 80 ICFYLEAGD 88>XP_005266890 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ICIFIEAVD 9 IC ++EA D Sbjct: 79 ICFYLEAGD 87>NP_055994 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ICIFIEA 7 +C+F EA Sbjct: 494 LCVFFEA 500>NP_001138586 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ICIFIEA 7 +C+F EA Sbjct: 433 LCVFFEA 439>NP_054786 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ICIFIE 6 IC+F+E Sbjct: 303 ICVFLE 308>NP_114141 Length = 5635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CIFIEAVD 9 C+ I AVD Sbjct: 541 CLIISAVD 548>NP_001271266 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ICIFIEA 7 +C+F EA Sbjct: 394 LCVFFEA 400>XP_005273996 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ICIFIE 6 IC+F+E Sbjct: 303 ICVFLE 308>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CIFIEA 7 C+F+EA Sbjct: 6795 CVFLEA 6800>NP_000227 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +CIFI++ Sbjct: 14 LCIFIQS 20>NP_937762 Length = 3333 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +C+++EA Sbjct: 3206 LCVYLEA 3212>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ICIFIE 6 +CIF+E Sbjct: 89 LCIFLE 94>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ICIFIE 6 +CIF+E Sbjct: 89 LCIFLE 94>NP_001121190 Length = 1668 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +C+++EA Sbjct: 1541 LCVYLEA 1547>NP_000218 Length = 1724 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +C+++EA Sbjct: 1597 LCVYLEA 1603>NP_001121189 Length = 3277 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +C+++EA Sbjct: 3150 LCVYLEA 3156>XP_006720564 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +CIFI++ Sbjct: 14 LCIFIQS 20>XP_005254429 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ICIFIEA 7 +CIFI++ Sbjct: 14 LCIFIQS 20>XP_005276064 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ICIFIE 6 IC+FI+ Sbjct: 179 ICVFIQ 184Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.160 0.511 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,771 Number of extensions: 507 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |