Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 509 NP_005913 20 509 XP_005267046 20 509 XP_005267045 20 509 NP_056121 19 869 NP_000577 17 4312 NP_001129575 16 5631 NP_942002 16 5631 NP_000037 16 5631 NP_862820 16 5631 NP_001184188 16 5631 NP_036513 16 5631 XP_005248763 16 5631 XP_005248762 16 5631 XP_005248761 16 5631 XP_006714678 16 5631 XP_005248563 16 5631 NP_001230913 16 7355 NP_068810 16 7355 NP_001138610 16 7355 NP_001230914 16 7355 NP_061862 16 7355 XP_005268525 16 7355 XP_005268524 16 7355 XP_006714850 16 7355 XP_005268523 16 7355 NP_003325 15 9605 NP_695012 15 9605 NP_001545 15 9605 NP_004810 15 9605 NP_056003 15 9605 XP_005272707 15 9605 XP_005272706 15 9605 XP_005272705 15 9605 XP_005259343 15 9605 XP_006717795 15 9605 XP_006713959 15 9605 XP_005248043 15 9605 XP_006713958 15 9605 NP_065824 15 9605 NP_001106834 15 9605 NP_001106832 15 9605>NP_006715 Length = 1558 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IALVTNDRP 9 IALV NDRP Sbjct: 559 IALVKNDRP 567>NP_005913 Length = 1608 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IALVTNDRP 9 IALV NDRP Sbjct: 559 IALVKNDRP 567>XP_005267046 Length = 1554 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IALVTNDRP 9 IALV NDRP Sbjct: 559 IALVKNDRP 567>XP_005267045 Length = 1604 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IALVTNDRP 9 IALV NDRP Sbjct: 559 IALVKNDRP 567>NP_056121 Length = 2620 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IALVTNDRP 9 +AL+TN+RP Sbjct: 38 VALLTNERP 46>NP_000577 Length = 153 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +ALVTN P Sbjct: 14 LALVTNSAP 22>NP_001129575 Length = 1108 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 + +VTN RP Sbjct: 545 VPIVTNKRP 553>NP_942002 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 IAL+TN P Sbjct: 220 IALITNHPP 228>NP_000037 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 IAL+TN P Sbjct: 220 IALITNHPP 228>NP_862820 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IALVTNDR 8 +AL+TN+R Sbjct: 385 VALLTNER 392>NP_001184188 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IALVTNDR 8 +AL+TN+R Sbjct: 242 VALLTNER 249>NP_036513 Length = 711 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IALVTNDR 8 +AL+TN+R Sbjct: 385 VALLTNER 392>XP_005248763 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IALVTNDR 8 +AL+TN+R Sbjct: 332 VALLTNER 339>XP_005248762 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IALVTNDR 8 +AL+TN+R Sbjct: 332 VALLTNER 339>XP_005248761 Length = 684 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IALVTNDR 8 +AL+TN+R Sbjct: 385 VALLTNER 392>XP_006714678 Length = 306 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 IAL+TN P Sbjct: 220 IALITNHPP 228>XP_005248563 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 IAL+TN P Sbjct: 220 IALITNHPP 228>NP_001230913 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 I+LVT D P Sbjct: 74 ISLVTKDPP 82>NP_068810 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 I+LVT D P Sbjct: 74 ISLVTKDPP 82>NP_001138610 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 I+LVT D P Sbjct: 74 ISLVTKDPP 82>NP_001230914 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 I+LVT D P Sbjct: 74 ISLVTKDPP 82>NP_061862 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +ALV D+P Sbjct: 33 VALVKKDKP 41>XP_005268525 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +ALV D+P Sbjct: 33 VALVKKDKP 41>XP_005268524 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +ALV D+P Sbjct: 33 VALVKKDKP 41>XP_006714850 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +ALV D+P Sbjct: 33 VALVKKDKP 41>XP_005268523 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +ALV D+P Sbjct: 33 VALVKKDKP 41>NP_003325 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +++VT D P Sbjct: 221 VSMVTKDNP 229>NP_695012 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +++VT D P Sbjct: 221 VSMVTKDNP 229>NP_001545 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 VTNDRP 9 VTND P Sbjct: 251 VTNDNP 256>NP_004810 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ALVTND 7 AL+TND Sbjct: 44 ALITND 49>NP_056003 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 396 ALILEDRP 403>XP_005272707 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +++VT D P Sbjct: 221 VSMVTKDNP 229>XP_005272706 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +++VT D P Sbjct: 227 VSMVTKDNP 235>XP_005272705 Length = 1109 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IALVTNDRP 9 +++VT D P Sbjct: 272 VSMVTKDNP 280>XP_005259343 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ALVTND 7 AL+TND Sbjct: 44 ALITND 49>XP_006717795 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 489 ALILEDRP 496>XP_006713959 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 85 ALILEDRP 92>XP_005248043 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 313 ALILEDRP 320>XP_006713958 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 313 ALILEDRP 320>NP_065824 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 313 ALILEDRP 320>NP_001106834 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 33 ALILEDRP 40>NP_001106832 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALVTNDRP 9 AL+ DRP Sbjct: 313 ALILEDRP 320Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 576,355 Number of extensions: 757 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |