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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005912                                                              17    4312
XP_005248577                                                           17    4312
XP_005248576                                                           17    4312
NP_001373                                                              15    9605
NP_056121                                                              15    9605
XP_005271479                                                           15    9605
XP_005270747                                                           15    9605
XP_006710574                                                           15    9605
XP_005270746                                                           15    9605
NP_055230                                                              15    9605

>NP_005912
          Length = 1512

 Score = 16.5 bits (31), Expect =  4312
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   IAEAIQLVV 9
           IAEAIQL V
Sbjct: 865 IAEAIQLGV 873



>XP_005248577
          Length = 1349

 Score = 16.5 bits (31), Expect =  4312
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   IAEAIQLVV 9
           IAEAIQL V
Sbjct: 702 IAEAIQLGV 710



>XP_005248576
          Length = 1375

 Score = 16.5 bits (31), Expect =  4312
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   IAEAIQLVV 9
           IAEAIQL V
Sbjct: 728 IAEAIQLGV 736



>NP_001373
          Length = 408

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   IAEAIQLV 8
           +AE++QLV
Sbjct: 336 VAESLQLV 343



>NP_056121
          Length = 2620

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   EAIQLVV 9
           EAIQL++
Sbjct: 841 EAIQLII 847



>XP_005271479
          Length = 434

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   IAEAIQLV 8
           +AE++QLV
Sbjct: 336 VAESLQLV 343



>XP_005270747
          Length = 2025

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   EAIQLVV 9
           EAIQL++
Sbjct: 246 EAIQLII 252



>XP_006710574
          Length = 2445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   EAIQLVV 9
           EAIQL++
Sbjct: 666 EAIQLII 672



>XP_005270746
          Length = 2443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   EAIQLVV 9
           EAIQL++
Sbjct: 666 EAIQLII 672



>NP_055230
          Length = 1053

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    IAEAIQLV 8
            +AEAIQ V
Sbjct: 1035 VAEAIQTV 1042



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.330    0.141    0.317 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 265,958
Number of extensions: 257
Number of successful extensions: 10
Number of sequences better than 10000.0: 10
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 10
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.2 bits)
S2: 28 (15.4 bits)