Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1135 NP_000242 18 1135 XP_005264389 18 1135 NP_852478 17 2528 NP_665803 17 3301 NP_444284 16 5631 XP_006718716 16 5631 NP_003923 16 7355 NP_001265518 16 7355 NP_001268232 15 9605 NP_006406 15 9605 NP_570853 15 9605 NP_002327 15 9605 NP_570854 15 9605 NP_000453 15 9605 NP_004456 15 9605 NP_683710 15 9605 NP_001166251 15 9605 NP_001166250 15 9605 NP_001107604 15 9605 NP_006575 15 9605 NP_001180459 15 9605 NP_001180458 15 9605 XP_006721704 15 9605 XP_005268328 15 9605 XP_006720739 15 9605 XP_005268327 15 9605 XP_005268326 15 9605 XP_005268324 15 9605 XP_005268325 15 9605 XP_006720738 15 9605 XP_006720737 15 9605 XP_006720736 15 9605 XP_006719141 15 9605 XP_006716207 15 9605 XP_006716206 15 9605 XP_005248321 15 9605 XP_005247190 15 9605 XP_006713571 15 9605 XP_005246845 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 NP_683711 15 9605>NP_001245210 Length = 868 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 IAAV+ALNL Sbjct: 238 IAAVRALNL 246>NP_000242 Length = 934 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 IAAV+ALNL Sbjct: 304 IAAVRALNL 312>XP_005264389 Length = 921 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 IAAV+ALNL Sbjct: 304 IAAVRALNL 312>NP_852478 Length = 1179 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IAAVKALNL 9 IAAVK LNL Sbjct: 575 IAAVKDLNL 583>NP_665803 Length = 1025 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 +AAVKAL+L Sbjct: 176 LAAVKALSL 184>NP_444284 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IAAVKALNL 9 +AAV+ LNL Sbjct: 209 VAAVQGLNL 217>XP_006718716 Length = 303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IAAVKALNL 9 +AAV+ LNL Sbjct: 217 VAAVQGLNL 225>NP_003923 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IAAVKALN 8 +AA++ALN Sbjct: 119 VAAIEALN 126>NP_001265518 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IAAVKALN 8 +AA++ALN Sbjct: 109 VAAIEALN 116>NP_001268232 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AA++ALN+ Sbjct: 348 AAIEALNI 355>NP_006406 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AA++ALN+ Sbjct: 348 AAIEALNI 355>NP_570853 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>NP_002327 Length = 1613 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IAAVKALNL 9 I AVK LNL Sbjct: 1191 IHAVKELNL 1199>NP_570854 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 65 AAIKALEL 72>NP_000453 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 68 AAIKALEL 75>NP_004456 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IAAVKALN 8 + AVKA+N Sbjct: 120 VVAVKAIN 127>NP_683710 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 +AA++A+N+ Sbjct: 181 VAAMRAINI 189>NP_001166251 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVKALNL 9 A+KA+NL Sbjct: 236 AIKAINL 242>NP_001166250 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVKALNL 9 A+KA+NL Sbjct: 236 AIKAINL 242>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2231 AAVEALNV 2238>NP_006575 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IAAVKALN 8 +AA+KA+N Sbjct: 1 MAAIKAVN 8>NP_001180459 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IAAVKALN 8 +AA+KA+N Sbjct: 1 MAAIKAVN 8>NP_001180458 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IAAVKALN 8 +AA+KA+N Sbjct: 1 MAAIKAVN 8>XP_006721704 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IAAVKALN 8 +AA+KA+N Sbjct: 1 MAAIKAVN 8>XP_005268328 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_006720739 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_005268327 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_005268326 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_005268324 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_005268325 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_006720738 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 45 AAIKALEL 52>XP_006720737 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 65 AAIKALEL 72>XP_006720736 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAVKALNL 9 AA+KAL L Sbjct: 65 AAIKALEL 72>XP_006719141 Length = 1613 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IAAVKALNL 9 I AVK LNL Sbjct: 1191 IHAVKELNL 1199>XP_006716207 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 +AA++A+N+ Sbjct: 68 VAAMRAINI 76>XP_006716206 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 +AA++A+N+ Sbjct: 181 VAAMRAINI 189>XP_005248321 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IAAVKALN 8 + AVKA+N Sbjct: 120 VVAVKAIN 127>XP_005247190 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVKALNL 9 A+KA+NL Sbjct: 175 AIKAINL 181>XP_006713571 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVKALNL 9 A+KA+NL Sbjct: 218 AIKAINL 224>XP_005246845 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 1148 AAVEALNV 1155>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2203 AAVEALNV 2210>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2260 AAVEALNV 2267>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2231 AAVEALNV 2238>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2260 AAVEALNV 2267>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2260 AAVEALNV 2267>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAVKALNL 9 AAV+ALN+ Sbjct: 2260 AAVEALNV 2267>NP_683711 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IAAVKALNL 9 +AA++A+N+ Sbjct: 174 VAAMRAINI 182Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.132 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 220,028 Number of extensions: 392 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |