Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 21 175 NP_001091680 21 175 NP_001091679 21 175 XP_006713048 21 175 XP_006713047 21 175 XP_006713046 21 175 XP_005264943 21 175 NP_758424 17 4312 NP_061142 17 4312 NP_054735 16 5631 NP_064450 16 7355 XP_005273257 16 7355 NP_000375 15 9605 NP_858059 15 9605 NP_858058 15 9605 NP_001137499 15 9605 NP_055249 15 9605 NP_001137500 15 9605 NP_001034 15 9605 NP_001137498 15 9605 NP_001135920 15 9605 NP_001165972 15 9605 NP_001165973 15 9605 NP_001135921 15 9605 NP_001165975 15 9605 NP_001193762 15 9605 NP_874369 15 9605 NP_006379 15 9605 NP_874368 15 9605 NP_872344 15 9605 NP_001431 15 9605 XP_005262365 15 9605 XP_006724777 15 9605 XP_006721326 15 9605 XP_006721159 15 9605 XP_005255675 15 9605 XP_006718484 15 9605 XP_006717119 15 9605 XP_005266123 15 9605 XP_006716365 15 9605 XP_006713086 15 9605 NP_001135923 15 9605 NP_114427 15 9605>NP_001895 Length = 781 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 134 HAVVNLINY 142>NP_001091680 Length = 781 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 134 HAVVNLINY 142>NP_001091679 Length = 781 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 134 HAVVNLINY 142>XP_006713048 Length = 720 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 134 HAVVNLINY 142>XP_006713047 Length = 774 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 127 HAVVNLINY 135>XP_006713046 Length = 774 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 127 HAVVNLINY 135>XP_005264943 Length = 781 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVVVNLINY 9 H VVNLINY Sbjct: 134 HAVVNLINY 142>NP_758424 Length = 1642 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVVVNLINY 9 H+V NL+ Y Sbjct: 651 HIVWNLLKY 659>NP_061142 Length = 1642 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVVVNLINY 9 H+V NL+ Y Sbjct: 651 HIVWNLLKY 659>NP_054735 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVVNLIN 8 V++NLIN Sbjct: 303 VIINLIN 309>NP_064450 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HVVVNLIN 8 H VVNL N Sbjct: 1384 HAVVNLDN 1391>XP_005273257 Length = 1726 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HVVVNLIN 8 H VVNL N Sbjct: 1388 HAVVNLDN 1395>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVVVNLI 7 H V+NLI Sbjct: 2319 HFVINLI 2325>NP_858059 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HVVVNLINY 9 H++VN+ Y Sbjct: 624 HILVNMNGY 632>NP_858058 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HVVVNLINY 9 H++VN+ Y Sbjct: 634 HILVNMNGY 642>NP_001137499 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVNLIN 8 VVNLIN Sbjct: 45 VVNLIN 50>NP_055249 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVNLIN 8 VVNLIN Sbjct: 45 VVNLIN 50>NP_001137500 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVNLIN 8 VVNLIN Sbjct: 45 VVNLIN 50>NP_001034 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VVVNLINY 9 VVV++IN+ Sbjct: 533 VVVSIINF 540>NP_001137498 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVNLIN 8 VVNLIN Sbjct: 45 VVNLIN 50>NP_001135920 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 68 INLLNY 73>NP_001165972 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VVVNLINY 9 VVV++IN+ Sbjct: 533 VVVSIINF 540>NP_001165973 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VVVNLINY 9 VVV++IN+ Sbjct: 428 VVVSIINF 435>NP_001135921 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 68 INLLNY 73>NP_001165975 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VVVNLINY 9 VVV++IN+ Sbjct: 533 VVVSIINF 540>NP_001193762 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NLINY Sbjct: 443 LNLINY 448>NP_874369 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NLINY Sbjct: 495 LNLINY 500>NP_006379 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NLINY Sbjct: 462 LNLINY 467>NP_874368 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NLINY Sbjct: 410 LNLINY 415>NP_872344 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 54 INLLNY 59>NP_001431 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVVVNL 6 HV++NL Sbjct: 273 HVIINL 278>XP_005262365 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HVVVNLINY 9 H++VN+ Y Sbjct: 253 HILVNMNGY 261>XP_006724777 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HVVVNLINY 9 H++VN+ Y Sbjct: 611 HILVNMNGY 619>XP_006721326 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VVVNLINY 9 VVV++IN+ Sbjct: 533 VVVSIINF 540>XP_006721159 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 113 INLLNY 118>XP_005255675 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 113 INLLNY 118>XP_006718484 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NLINY Sbjct: 471 LNLINY 476>XP_006717119 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVNLIN 8 VVNLIN Sbjct: 45 VVNLIN 50>XP_005266123 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVNLIN 8 VVNLIN Sbjct: 45 VVNLIN 50>XP_006716365 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVVVNL 6 HV++NL Sbjct: 273 HVIINL 278>XP_006713086 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVVNLINY 9 +++NLI Y Sbjct: 1277 ILINLIKY 1284>NP_001135923 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 68 INLLNY 73>NP_114427 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNLINY 9 +NL+NY Sbjct: 68 INLLNY 73Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.147 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,452 Number of extensions: 869 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |