Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005271739 17 4312 XP_005251811 17 4312 XP_005251810 17 4312 XP_005251809 17 4312 NP_003469 17 4312 NP_009124 16 5631 NP_055134 16 5631 NP_001137416 16 5631 NP_851853 16 5631 NP_001161086 16 5631 NP_004764 16 5631 NP_001268363 16 5631 XP_006714136 16 5631 NP_001177645 16 7355 NP_004936 16 7355 NP_001005361 16 7355 NP_001005360 16 7355 NP_001005362 16 7355 NP_055141 16 7355 NP_001018066 16 7355 NP_003374 16 7355 NP_002363 16 7355 NP_077734 16 7355 XP_005254325 16 7355 XP_006720513 16 7355 XP_006720512 16 7355 XP_006716928 16 7355 XP_006716927 16 7355 XP_006714679 16 7355 XP_005245324 16 7355 NP_000161 15 9605 NP_001138663 15 9605 XP_005250256 15 9605 XP_005264214 15 9605 NP_659802 15 9605 NP_689729 15 9605>XP_005271739 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VRESLVNL 9 VRES VNL Sbjct: 121 VRESYVNL 128>XP_005251811 Length = 3060 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H+ ES++N+ Sbjct: 3044 HIPESIINI 3052>XP_005251810 Length = 3062 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H+ ES++N+ Sbjct: 3046 HIPESIINI 3054>XP_005251809 Length = 3063 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H+ ES++N+ Sbjct: 3047 HIPESIINI 3055>NP_003469 Length = 780 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VRESLVNL 9 VRES VNL Sbjct: 180 VRESYVNL 187>NP_009124 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H R++L+NL Sbjct: 150 HFRDTLMNL 158>NP_055134 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HVRESLV 7 HVR+SL+ Sbjct: 698 HVRDSLI 704>NP_001137416 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HVRESLV 7 HVR+SL+ Sbjct: 141 HVRDSLI 147>NP_851853 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HVRESLV 7 HVR+SL+ Sbjct: 443 HVRDSLI 449>NP_001161086 Length = 910 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HVRESLV 7 HVR+SL+ Sbjct: 697 HVRDSLI 703>NP_004764 Length = 155 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H+R+ +VNL Sbjct: 109 HLRQLMVNL 117>NP_001268363 Length = 99 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H+R+ +VNL Sbjct: 53 HLRQLMVNL 61>XP_006714136 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HVRESLVNL 9 H R++L+NL Sbjct: 173 HFRDTLMNL 181>NP_001177645 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVRESL 6 H+RESL Sbjct: 288 HIRESL 293>NP_004936 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVRESL 6 H+RESL Sbjct: 288 HIRESL 293>NP_001005361 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVRESL 6 H+RESL Sbjct: 288 HIRESL 293>NP_001005360 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVRESL 6 H+RESL Sbjct: 288 HIRESL 293>NP_001005362 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVRESL 6 H+RESL Sbjct: 288 HIRESL 293>NP_055141 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RESLVNL 9 RES+VNL Sbjct: 297 RESVVNL 303>NP_001018066 Length = 845 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVRESLVN 8 H+ E LVN Sbjct: 356 HINECLVN 363>NP_003374 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVRESLVN 8 H+ E LVN Sbjct: 356 HINECLVN 363>NP_002363 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 HVRESLVNL 9 ++R+S++NL Sbjct: 71 NIRDSVINL 79>NP_077734 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVRESLVNL 9 H+RES+ L Sbjct: 164 HIRESMKKL 172>XP_005254325 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RESLVNL 9 RES+VNL Sbjct: 300 RESVVNL 306>XP_006720513 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RESLVNL 9 RES+VNL Sbjct: 300 RESVVNL 306>XP_006720512 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RESLVNL 9 RES+VNL Sbjct: 300 RESVVNL 306>XP_006716928 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVRESLVN 8 H+ E LVN Sbjct: 356 HINECLVN 363>XP_006716927 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVRESLVN 8 H+ E LVN Sbjct: 356 HINECLVN 363>XP_006714679 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 HVRESLVNL 9 ++R+S++NL Sbjct: 71 NIRDSVINL 79>XP_005245324 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVRESLVNL 9 H+RES+ L Sbjct: 127 HIRESMKKL 135>NP_000161 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRESLVNL 9 VRESLV + Sbjct: 336 VRESLVRM 343>NP_001138663 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 1 HVRESLVN 8 H+ E+++N Sbjct: 490 HIEENIIN 497>XP_005250256 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 1 HVRESLVN 8 H+ E+++N Sbjct: 405 HIEENIIN 412>XP_005264214 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRESLVN 8 +RESL+N Sbjct: 39 IRESLMN 45>NP_659802 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 1 HVRESLVN 8 H+ E+++N Sbjct: 405 HIEENIIN 412>NP_689729 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRESLVN 8 +RESL+N Sbjct: 105 IRESLMN 111Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.134 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,807 Number of extensions: 810 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |