Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 390 NP_848537 17 4312 NP_113659 17 4312 XP_006718768 17 4312 XP_006718767 17 4312 XP_006718766 17 4312 NP_066969 16 5631 NP_055144 16 5631 NP_001026 16 7355 NP_060773 16 7355 NP_775925 16 7355 NP_001265618 16 7355 XP_006715205 16 7355 XP_006715204 16 7355 XP_005264801 16 7355 XP_006713174 16 7355 XP_005264800 16 7355 XP_006711873 16 7355 XP_006711872 16 7355 XP_006711871 16 7355 XP_006711870 16 7355 XP_006711869 16 7355 XP_006711868 16 7355 XP_006711867 16 7355 XP_006711866 16 7355 XP_006711865 16 7355 NP_671517 15 9605 NP_060569 15 9605 NP_694996 15 9605 NP_056362 15 9605 NP_000848 15 9605 NP_001258713 15 9605 NP_001258712 15 9605 NP_689594 15 9605 NP_570123 15 9605 NP_536354 15 9605 NP_001265227 15 9605 XP_006718009 15 9605 XP_006714595 15 9605 XP_006714594 15 9605 XP_005263016 15 9605 XP_006712319 15 9605 NP_001186073 15 9605 NP_001004485 15 9605>NP_004295 Length = 1620 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVNTAFSQS 9 HVN AFSQS Sbjct: 1475 HVNMAFSQS 1483>NP_848537 Length = 667 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H+N AFS Sbjct: 616 HINVAFS 622>NP_113659 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H+N AFS Sbjct: 612 HINVAFS 618>XP_006718768 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H+N AFS Sbjct: 432 HINVAFS 438>XP_006718767 Length = 616 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H+N AFS Sbjct: 565 HINVAFS 571>XP_006718766 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H+N AFS Sbjct: 612 HINVAFS 618>NP_066969 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H NTAFS Sbjct: 266 HNNTAFS 272>NP_055144 Length = 1401 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 H+N AF Q+ Sbjct: 1276 HLNQAFQQA 1284>NP_001026 Length = 4967 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>NP_060773 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVNTAFSQ 8 H NT+F Q Sbjct: 175 HSNTSFEQ 182>NP_775925 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 HVN +FS Sbjct: 261 HVNNSFS 267>NP_001265618 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 HVN +FS Sbjct: 261 HVNNSFS 267>XP_006715205 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVNTAFSQ 8 H NT+F Q Sbjct: 175 HSNTSFEQ 182>XP_006715204 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVNTAFSQ 8 H NT+F Q Sbjct: 175 HSNTSFEQ 182>XP_005264801 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 HVN +FS Sbjct: 261 HVNNSFS 267>XP_006713174 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 HVN +FS Sbjct: 261 HVNNSFS 267>XP_005264800 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 HVN +FS Sbjct: 261 HVNNSFS 267>XP_006711873 Length = 4954 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711872 Length = 2735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711871 Length = 4906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711870 Length = 4965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711869 Length = 4973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711868 Length = 4975 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711867 Length = 4977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711866 Length = 4984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>XP_006711865 Length = 4985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVNTAFSQS 9 HV+ AF Q+ Sbjct: 202 HVDAAFQQT 210>NP_671517 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVNTAF 6 H+N+AF Sbjct: 315 HINSAF 320>NP_060569 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HVNTAFS 7 H++TA+S Sbjct: 150 HISTAYS 156>NP_694996 Length = 2526 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HVNTAFSQ 8 H+ T+F Q Sbjct: 2044 HIQTSFQQ 2051>NP_056362 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVNTAF 6 H+N+AF Sbjct: 315 HINSAF 320>NP_000848 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 1 HVNTAF 6 H+NT F Sbjct: 271 HINTVF 276>NP_001258713 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HVNTAFS 7 H++TA+S Sbjct: 53 HISTAYS 59>NP_001258712 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HVNTAFS 7 H++TA+S Sbjct: 150 HISTAYS 156>NP_689594 Length = 3549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TAFSQS 9 TAFSQS Sbjct: 467 TAFSQS 472>NP_570123 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVNTAF 6 H+N+AF Sbjct: 280 HINSAF 285>NP_536354 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVNTAFS 7 H+N AFS Sbjct: 80 HLNPAFS 86>NP_001265227 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HVNTAFSQ 8 H+ T+F Q Sbjct: 2044 HIQTSFQQ 2051>XP_006718009 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VNTAFSQ 8 +NTAF+Q Sbjct: 234 MNTAFNQ 240>XP_006714595 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVNTAF 6 H+N+AF Sbjct: 280 HINSAF 285>XP_006714594 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HVNTAF 6 H+N+AF Sbjct: 280 HINSAF 285>XP_005263016 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 1 HVNTAF 6 H+NT F Sbjct: 203 HINTVF 208>XP_006712319 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TAFSQS 9 TAFSQS Sbjct: 226 TAFSQS 231>NP_001186073 Length = 3327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TAFSQS 9 TAFSQS Sbjct: 245 TAFSQS 250>NP_001004485 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVNTAF 6 H NTAF Sbjct: 309 HFNTAF 314Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.110 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 382,796 Number of extensions: 647 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |