Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 509 XP_006717990 20 509 XP_006717989 20 509 NP_055660 18 1135 XP_006715685 18 1135 NP_115515 17 2528 XP_005259367 17 2528 XP_006723476 17 2528 XP_006723475 17 2528 NP_004215 17 4312 NP_001017921 17 4312 NP_001008739 17 4312 NP_001071153 16 5631 NP_775866 16 7355 XP_005273481 16 7355 NP_001027006 16 7355 NP_001025041 16 7355 NP_001276980 15 9605 NP_001276979 15 9605 NP_001276981 15 9605 NP_037414 15 9605 NP_001041666 15 9605 NP_002494 15 9605 NP_775841 15 9605 NP_055685 15 9605 NP_001274532 15 9605 NP_003434 15 9605 NP_001161693 15 9605 NP_001257589 15 9605 NP_001257590 15 9605 NP_005876 15 9605 NP_001230045 15 9605 XP_006723290 15 9605 XP_006723289 15 9605 XP_005247326 15 9605 XP_006713625 15 9605 XP_005247324 15 9605 XP_006713624 15 9605 XP_005247323 15 9605 XP_005247322 15 9605 XP_005246404 15 9605 XP_005246043 15 9605 NP_001077090 15 9605>NP_000305 Length = 403 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAAIH KA Sbjct: 118 HVAAIHCKA 126>XP_006717990 Length = 175 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAAIH KA Sbjct: 103 HVAAIHCKA 111>XP_006717989 Length = 388 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAAIH KA Sbjct: 103 HVAAIHCKA 111>NP_055660 Length = 907 Score = 18.5 bits (36), Expect = 1135 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HVAAIHF 7 HVAA+HF Sbjct: 355 HVAALHF 361>XP_006715685 Length = 761 Score = 18.5 bits (36), Expect = 1135 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HVAAIHF 7 HVAA+HF Sbjct: 209 HVAALHF 215>NP_115515 Length = 1050 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAA+H +A Sbjct: 749 HVAALHGRA 757>XP_005259367 Length = 854 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAA+H +A Sbjct: 553 HVAALHGRA 561>XP_006723476 Length = 979 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAA+H +A Sbjct: 749 HVAALHGRA 757>XP_006723475 Length = 1050 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 HVAA+H +A Sbjct: 749 HVAALHGRA 757>NP_004215 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AAIHFKA 9 A++HFKA Sbjct: 442 ASVHFKA 448>NP_001017921 Length = 169 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HVAAIHFKA 9 H+AA+H +A Sbjct: 15 HLAAVHRRA 23>NP_001008739 Length = 101 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVAAIH 6 H+AAIH Sbjct: 41 HIAAIH 46>NP_001071153 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HV+ +HF Sbjct: 109 HVSTVHF 115>NP_775866 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVAAIH 6 H+AAIH Sbjct: 311 HMAAIH 316>XP_005273481 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HVAAIHFK 8 HV ++HF+ Sbjct: 77 HVRSLHFQ 84>NP_001027006 Length = 1149 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HVAAIHFK 8 HV ++HF+ Sbjct: 77 HVRSLHFQ 84>NP_001025041 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HVAAIH 6 H+AAIH Sbjct: 675 HLAAIH 680>NP_001276980 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 445 HVAGIH 450>NP_001276979 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 445 HVAGIH 450>NP_001276981 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 445 HVAGIH 450>NP_037414 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 458 HVAGIH 463>NP_001041666 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 445 HVAGIH 450>NP_002494 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 212 HVAVIH 217>NP_775841 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 104 HVASWHF 110>NP_055685 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 HVAAIHFK 8 HV HFK Sbjct: 1122 HVTTEHFK 1129>NP_001274532 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VAAIHFKA 9 V +HFKA Sbjct: 30 VDGVHFKA 37>NP_003434 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VAAIHFKA 9 V +HFKA Sbjct: 30 VDGVHFKA 37>NP_001161693 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVAAIHFKA 9 HV+ HF+A Sbjct: 819 HVSKKHFEA 827>NP_001257589 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVAAIHFK 8 HV A HF+ Sbjct: 276 HVQASHFE 283>NP_001257590 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVAAIHFK 8 HV A HF+ Sbjct: 219 HVQASHFE 226>NP_005876 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HVAAIHFK 8 HV A HF+ Sbjct: 324 HVQASHFE 331>NP_001230045 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 126 HVAVIH 131>XP_006723290 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 207 HVAVIH 212>XP_006723289 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HVAAIH 6 HVA IH Sbjct: 272 HVAVIH 277>XP_005247326 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 104 HVASWHF 110>XP_006713625 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 104 HVASWHF 110>XP_005247324 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 98 HVASWHF 104>XP_006713624 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 104 HVASWHF 110>XP_005247323 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 104 HVASWHF 110>XP_005247322 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HVAAIHF 7 HVA+ HF Sbjct: 104 HVASWHF 110>XP_005246404 Length = 1821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HVAAIHFKA 9 HV+ HF+A Sbjct: 820 HVSKKHFEA 828>XP_005246043 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VAAIHFKA 9 V +HFKA Sbjct: 30 VDGVHFKA 37>NP_001077090 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 HVAAIHFK 8 HV HFK Sbjct: 1122 HVTTEHFK 1129Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.133 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,620 Number of extensions: 891 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |