Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_002221 19 665 NP_068831 19 665 XP_006721941 19 665 XP_006721940 19 665 XP_006721939 19 665 XP_006721938 19 665 XP_006721937 19 665 XP_006721936 19 665 XP_006721935 19 665 XP_006721934 19 665 XP_005257370 19 665 NP_055690 17 2528 NP_112181 17 4312 NP_001273279 16 5631 NP_001243793 16 5631 NP_001243794 16 5631 NP_055602 16 5631 NP_999627 16 5631 NP_001191304 16 5631 NP_000899 16 5631 NP_001191305 16 5631 NP_004776 16 5631 NP_001123484 16 5631 XP_005248366 16 5631 NP_075054 16 5631 NP_003873 16 7355 NP_543028 16 7355 NP_001275918 16 7355 NP_057425 16 7355 NP_006827 16 7355 NP_071896 16 7355 XP_006717952 16 7355 XP_006717951 16 7355 XP_006717950 16 7355 XP_006717949 16 7355 XP_006717948 16 7355 XP_006716743 16 7355 NP_001004450 16 7355 NP_002448 15 9605 NP_001107039 15 9605 NP_997270 15 9605 NP_000695 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 450 TVLRAGDR 457>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 450 TVLRAGDR 457>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 450 TVLRAGDR 457>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 450 TVLRAGDR 457>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 443 TVLRAGDR 450>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 443 TVLRAGDR 450>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TVLRAGDR 9 TVLRAGDR Sbjct: 450 TVLRAGDR 457>NP_002221 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>NP_068831 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721941 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721940 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721939 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721938 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721937 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721936 Length = 745 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 440 HAILRAGDK 448>XP_006721935 Length = 762 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 457 HAILRAGDK 465>XP_006721934 Length = 783 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 478 HAILRAGDK 486>XP_005257370 Length = 783 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 H +LRAGD+ Sbjct: 478 HAILRAGDK 486>NP_055690 Length = 1648 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TVLRAGDR 9 TVLR GDR Sbjct: 880 TVLRHGDR 887>NP_112181 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTVLRAGDR 9 H +LRA +R Sbjct: 96 HAILRAAER 104>NP_001273279 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HTVLRAGDR 9 HT R GDR Sbjct: 519 HTTNRFGDR 527>NP_001243793 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTVL AG+ Sbjct: 898 HTVLWAGE 905>NP_001243794 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTVL AG+ Sbjct: 828 HTVLWAGE 835>NP_055602 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTVL AG+ Sbjct: 841 HTVLWAGE 848>NP_999627 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HTVLRAGDR 9 HT R GDR Sbjct: 689 HTTNRFGDR 697>NP_001191304 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HTVLRAG 7 H VLRAG Sbjct: 373 HEVLRAG 379>NP_000899 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HTVLRAG 7 H VLRAG Sbjct: 373 HEVLRAG 379>NP_001191305 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HTVLRAG 7 H VLRAG Sbjct: 157 HEVLRAG 163>NP_004776 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRAGDR 9 LRAGDR Sbjct: 50 LRAGDR 55>NP_001123484 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRAGDR 9 LRAGDR Sbjct: 50 LRAGDR 55>XP_005248366 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HTVLRAG 7 H VLRAG Sbjct: 157 HEVLRAG 163>NP_075054 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TVLRAGD 8 T+LR+GD Sbjct: 63 TILRSGD 69>NP_003873 Length = 367 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 HT+++AG + Sbjct: 264 HTLIKAGKK 272>NP_543028 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 HT+++AG + Sbjct: 177 HTLIKAGKK 185>NP_001275918 Length = 2286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>NP_057425 Length = 2302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>NP_006827 Length = 2671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TVLRAGDR 9 T LRAG R Sbjct: 1796 TALRAGQR 1803>NP_071896 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HT++ +GD Sbjct: 542 HTLIESGD 549>XP_006717952 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>XP_006717951 Length = 2315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>XP_006717950 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>XP_006717949 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>XP_006717948 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTVLRAGD 8 HTV R+G+ Sbjct: 42 HTVRRSGE 49>XP_006716743 Length = 202 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HTVLRAGDR 9 HT+++AG + Sbjct: 99 HTLIKAGKK 107>NP_001004450 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HTVLRAG 7 HT+LR G Sbjct: 157 HTMLRVG 163>NP_002448 Length = 5179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HTVLRAGD 8 H +L+ GD Sbjct: 5004 HVILKPGD 5011>NP_001107039 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLRAGDR 9 +LRAGD+ Sbjct: 34 LLRAGDK 40>NP_997270 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLRAGDR 9 +LRAGD+ Sbjct: 34 LLRAGDK 40>NP_000695 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TVLRAGDR 9 TV+R GD+ Sbjct: 181 TVIRDGDK 188Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.140 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 558,639 Number of extensions: 1245 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |