Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 21 175 NP_671714 21 175 XP_006715890 21 175 XP_005250160 21 175 XP_005250159 21 175 NP_689412 17 3301 NP_689410 17 3301 NP_006231 17 3301 XP_006724563 17 3301 XP_005274611 17 3301 XP_005274610 17 3301 XP_006715077 17 3301 NP_001073379 17 4312 NP_787048 17 4312 NP_001239542 17 4312 NP_001136336 17 4312 NP_001239541 17 4312 NP_001014972 17 4312 NP_055312 17 4312 XP_006721417 17 4312 XP_006721416 17 4312 XP_006719697 17 4312 XP_006719696 17 4312 XP_006719695 17 4312 XP_005269238 17 4312 XP_005264321 17 4312 XP_006712053 17 4312 XP_005264320 17 4312 XP_006712052 17 4312 XP_005264319 17 4312 XP_005264318 17 4312 XP_005270651 17 4312 XP_006710487 17 4312 NP_001002759 16 5631 NP_660290 16 5631 XP_005269581 16 5631 XP_005269579 16 5631 XP_005269578 16 5631 NP_006230 16 5631 NP_071418 16 7355 XP_005247756 16 7355 XP_005247755 16 7355 NP_055558 15 9605 NP_001094060 15 9605 NP_001185524 15 9605 NP_001185523 15 9605 NP_758515 15 9605 NP_006864 15 9605 NP_001185522 15 9605 NP_997203 15 9605 NP_203754 15 9605 NP_001002909 15 9605 NP_000971 15 9605 XP_006721846 15 9605 XP_006721845 15 9605 XP_006721844 15 9605 XP_006718789 15 9605 XP_006718788 15 9605 XP_005274419 15 9605 XP_005248098 15 9605 XP_006713998 15 9605 XP_006713997 15 9605>NP_005742 Length = 3907 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTMYRSRSD 9 HT YRSRSD Sbjct: 3828 HTTYRSRSD 3836>NP_671714 Length = 3899 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTMYRSRSD 9 HT YRSRSD Sbjct: 3820 HTTYRSRSD 3828>XP_006715890 Length = 3860 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTMYRSRSD 9 HT YRSRSD Sbjct: 3781 HTTYRSRSD 3789>XP_005250160 Length = 3939 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTMYRSRSD 9 HT YRSRSD Sbjct: 3860 HTTYRSRSD 3868>XP_005250159 Length = 3952 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTMYRSRSD 9 HT YRSRSD Sbjct: 3873 HTTYRSRSD 3881>NP_689412 Length = 591 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TMYRSRSD 9 T+YR RSD Sbjct: 501 TLYRYRSD 508>NP_689410 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TMYRSRSD 9 T+YR RSD Sbjct: 535 TLYRYRSD 542>NP_006231 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TMYRSRSD 9 T+YR RSD Sbjct: 563 TLYRYRSD 570>XP_006724563 Length = 563 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TMYRSRSD 9 T+YR RSD Sbjct: 473 TLYRYRSD 480>XP_005274611 Length = 588 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TMYRSRSD 9 T+YR RSD Sbjct: 498 TLYRYRSD 505>XP_005274610 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TMYRSRSD 9 T+YR RSD Sbjct: 563 TLYRYRSD 570>XP_006715077 Length = 140 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TMYRSRS 8 T+YRSRS Sbjct: 73 TLYRSRS 79>NP_001073379 Length = 1722 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT + SRS+ Sbjct: 1508 HTQFNSRSE 1516>NP_787048 Length = 546 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TMYRSR 7 TMYRSR Sbjct: 430 TMYRSR 435>NP_001239542 Length = 1957 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 513 HYMYRPRS 520>NP_001136336 Length = 2521 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT YR+ +D Sbjct: 1951 HTKYRAATD 1959>NP_001239541 Length = 1978 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 513 HYMYRPRS 520>NP_001014972 Length = 1978 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 513 HYMYRPRS 520>NP_055312 Length = 1978 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 513 HYMYRPRS 520>XP_006721417 Length = 2497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT YR+ +D Sbjct: 1927 HTKYRAATD 1935>XP_006721416 Length = 2504 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT YR+ +D Sbjct: 1934 HTKYRAATD 1942>XP_006719697 Length = 1658 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT + SRS+ Sbjct: 1444 HTQFNSRSE 1452>XP_006719696 Length = 1696 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT + SRS+ Sbjct: 1444 HTQFNSRSE 1452>XP_006719695 Length = 1696 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT + SRS+ Sbjct: 1444 HTQFNSRSE 1452>XP_005269238 Length = 1696 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTMYRSRSD 9 HT + SRS+ Sbjct: 1444 HTQFNSRSE 1452>XP_005264321 Length = 1206 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 619 HYMYRPRS 626>XP_006712053 Length = 1467 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 2 HYMYRPRS 9>XP_005264320 Length = 1467 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 2 HYMYRPRS 9>XP_006712052 Length = 1467 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 2 HYMYRPRS 9>XP_005264319 Length = 2049 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 619 HYMYRPRS 626>XP_005264318 Length = 2084 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 H MYR RS Sbjct: 619 HYMYRPRS 626>XP_005270651 Length = 371 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TMYRSR 7 TMYRSR Sbjct: 255 TMYRSR 260>XP_006710487 Length = 464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TMYRSR 7 TMYRSR Sbjct: 430 TMYRSR 435>NP_001002759 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRS++D Sbjct: 178 MYRSKND 184>NP_660290 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRS++D Sbjct: 165 MYRSKND 171>XP_005269581 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRS++D Sbjct: 165 MYRSKND 171>XP_005269579 Length = 254 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRS++D Sbjct: 187 MYRSKND 193>XP_005269578 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRS++D Sbjct: 240 MYRSKND 246>NP_006230 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TMYRSRSD 9 T+YR+RS+ Sbjct: 649 TLYRNRSN 656>NP_071418 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HTMYRSRSD 9 H +YR R D Sbjct: 94 HLVYRLRED 102>XP_005247756 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HTMYRSRSD 9 H +YR R D Sbjct: 94 HLVYRLRED 102>XP_005247755 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HTMYRSRSD 9 H +YR R D Sbjct: 94 HLVYRLRED 102>NP_055558 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TMYRSRSD 9 T YR+R D Sbjct: 422 TTYRNRQD 429>NP_001094060 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TMYRSRSD 9 T YR+R D Sbjct: 422 TTYRNRQD 429>NP_001185524 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HTMYRSR 7 HT++RS+ Sbjct: 265 HTLFRSQ 271>NP_001185523 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HTMYRSR 7 HT++RS+ Sbjct: 265 HTLFRSQ 271>NP_758515 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HTMYRSR 7 HT++RS+ Sbjct: 265 HTLFRSQ 271>NP_006864 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HTMYRSR 7 HT++RS+ Sbjct: 265 HTLFRSQ 271>NP_001185522 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HTMYRSR 7 HT++RS+ Sbjct: 265 HTLFRSQ 271>NP_997203 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HTMYRSRSD 9 H MYR+ D Sbjct: 151 HCMYRAIQD 159>NP_203754 Length = 1729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRSR++ Sbjct: 1570 MYRSRAN 1576>NP_001002909 Length = 1502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 HT RSRS Sbjct: 949 HTRERSRS 956>NP_000971 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 HTMYRSRSD 9 H MYR D Sbjct: 91 HNMYREYRD 99>XP_006721846 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 HT RSRS Sbjct: 871 HTRERSRS 878>XP_006721845 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 HT RSRS Sbjct: 871 HTRERSRS 878>XP_006721844 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTMYRSRS 8 HT RSRS Sbjct: 871 HTRERSRS 878>XP_006718789 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRSR++ Sbjct: 894 MYRSRAN 900>XP_006718788 Length = 1729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRSR++ Sbjct: 1570 MYRSRAN 1576>XP_005274419 Length = 1808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYRSRSD 9 MYRSR++ Sbjct: 1649 MYRSRAN 1655>XP_005248098 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TMYRSRSD 9 T YR+R D Sbjct: 313 TTYRNRQD 320>XP_006713998 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TMYRSRSD 9 T YR+R D Sbjct: 422 TTYRNRQD 429>XP_006713997 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TMYRSRSD 9 T YR+R D Sbjct: 422 TTYRNRQD 429Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.121 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 489,859 Number of extensions: 707 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |