Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 869 NP_001120972 19 869 XP_006716052 19 869 XP_006716051 19 869 NP_115763 16 5631 NP_115597 16 5631 NP_079223 16 5631 XP_006723946 16 5631 XP_005260632 16 5631 XP_005260631 16 5631 XP_005260630 16 5631 XP_006722085 16 5631 XP_006722084 16 5631 XP_005257655 16 5631 XP_006722083 16 5631 XP_005257654 16 5631 XP_005257653 16 5631 XP_005257652 16 5631 XP_006713820 16 5631 XP_005247850 16 5631 XP_005247848 16 5631 XP_006713819 16 5631 XP_005247847 16 5631 XP_006713818 16 5631 XP_006713817 16 5631 XP_006713816 16 5631 XP_005247846 16 5631 NP_001017408 15 9605 NP_065132 15 9605 NP_056173 15 9605 XP_006724049 15 9605 XP_006724048 15 9605>NP_000236 Length = 1390 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 HTA IQSEV Sbjct: 150 HTADIQSEV 158>NP_001120972 Length = 1408 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 HTA IQSEV Sbjct: 150 HTADIQSEV 158>XP_006716052 Length = 1409 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 HTA IQSEV Sbjct: 169 HTADIQSEV 177>XP_006716051 Length = 1427 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 HTA IQSEV Sbjct: 169 HTADIQSEV 177>NP_115763 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 980 HTAEVESE 987>NP_115597 Length = 2715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTAAIQSE 8 HT IQSE Sbjct: 988 HTITIQSE 995>NP_079223 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_006723946 Length = 1414 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTAAIQSE 8 HT IQSE Sbjct: 988 HTITIQSE 995>XP_005260632 Length = 2377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTAAIQSE 8 HT IQSE Sbjct: 988 HTITIQSE 995>XP_005260631 Length = 2667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTAAIQSE 8 HT IQSE Sbjct: 940 HTITIQSE 947>XP_005260630 Length = 2693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HTAAIQSE 8 HT IQSE Sbjct: 966 HTITIQSE 973>XP_006722085 Length = 907 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 644 HTAEVESE 651>XP_006722084 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 644 HTAEVESE 651>XP_005257655 Length = 971 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 672 HTAEVESE 679>XP_006722083 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 934 HTAEVESE 941>XP_005257654 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 980 HTAEVESE 987>XP_005257653 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 979 HTAEVESE 986>XP_005257652 Length = 1279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTA ++SE Sbjct: 980 HTAEVESE 987>XP_006713820 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_005247850 Length = 614 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_005247848 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_006713819 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_005247847 Length = 983 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_006713818 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_006713817 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_006713816 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_005247846 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HTAAIQSE 8 HTAA+Q + Sbjct: 91 HTAALQQQ 98>NP_001017408 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTAAIQSEV 9 H A +Q+EV Sbjct: 184 HIAVLQAEV 192>NP_065132 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HTAAIQSEV 9 H A +Q+EV Sbjct: 192 HIAVLQAEV 200>NP_056173 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 +TAA Q+EV Sbjct: 636 NTAATQTEV 644>XP_006724049 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 +TAA Q+EV Sbjct: 675 NTAATQTEV 683>XP_006724048 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HTAAIQSEV 9 +TAA Q+EV Sbjct: 565 NTAATQTEV 573Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.110 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,513 Number of extensions: 842 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |