Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 20 509 NP_001087241 20 509 XP_005265799 20 509 XP_005265798 20 509 XP_005265797 20 509 NP_000543 17 3301 NP_064716 17 3301 NP_066267 17 4312 NP_940912 17 4312 XP_006717852 17 4312 XP_006717851 17 4312 XP_006717850 17 4312 XP_006717849 17 4312 XP_006717848 17 4312 XP_006717847 17 4312 XP_006717846 17 4312 XP_006717845 17 4312 XP_005250953 17 4312 XP_005250952 17 4312 XP_005250951 17 4312 NP_861452 17 4312 NP_057006 16 5631 NP_002438 16 5631 NP_001123237 16 5631 NP_694984 16 5631 XP_006724887 16 5631 XP_005262172 16 5631 XP_005262170 16 5631 XP_005265227 16 5631 NP_002221 16 7355 NP_068831 16 7355 NP_689758 16 7355 NP_003540 16 7355 NP_001186958 16 7355 NP_001186959 16 7355 XP_006721941 16 7355 XP_006721940 16 7355 XP_006721939 16 7355 XP_006721938 16 7355 XP_006721937 16 7355 XP_006721936 16 7355 XP_006721935 16 7355 XP_006721934 16 7355 XP_005257370 16 7355 XP_005262834 16 7355 XP_006714175 16 7355 XP_005262833 16 7355 NP_776159 16 7355 NP_065816 15 9605 NP_073153 15 9605 NP_001121182 15 9605 NP_001121181 15 9605 NP_001121180 15 9605 NP_005798 15 9605 XP_006726447 15 9605 XP_005276263 15 9605 XP_006726445 15 9605 XP_006712754 15 9605 XP_006712753 15 9605 XP_005264736 15 9605 XP_006712220 15 9605 XP_005244879 15 9605 XP_006711171 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605>NP_000213 Length = 976 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSVRINYVG 9 HSVRIN VG Sbjct: 953 HSVRINSVG 961>NP_001087241 Length = 972 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSVRINYVG 9 HSVRIN VG Sbjct: 949 HSVRINSVG 957>XP_005265799 Length = 973 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSVRINYVG 9 HSVRIN VG Sbjct: 950 HSVRINSVG 958>XP_005265798 Length = 976 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSVRINYVG 9 HSVRIN VG Sbjct: 953 HSVRINSVG 961>XP_005265797 Length = 977 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSVRINYVG 9 HSVRIN VG Sbjct: 954 HSVRINSVG 962>NP_000543 Length = 2813 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2048 HEVRFNHLG 2056>NP_064716 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRINYVG 9 +RINY+G Sbjct: 166 IRINYLG 172>NP_066267 Length = 4377 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2876 HDVRENHIG 2884>NP_940912 Length = 1313 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRINYVG 9 VR+NY+G Sbjct: 477 VRLNYLG 483>XP_006717852 Length = 3508 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2007 HDVRENHIG 2015>XP_006717851 Length = 3513 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2012 HDVRENHIG 2020>XP_006717850 Length = 4364 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2863 HDVRENHIG 2871>XP_006717849 Length = 4383 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2882 HDVRENHIG 2890>XP_006717848 Length = 4392 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2891 HDVRENHIG 2899>XP_006717847 Length = 4395 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2894 HDVRENHIG 2902>XP_006717846 Length = 4396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2895 HDVRENHIG 2903>XP_006717845 Length = 4397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H VR N++G Sbjct: 2896 HDVRENHIG 2904>XP_005250953 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H V+INY Sbjct: 437 HEVKINY 443>XP_005250952 Length = 618 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H V+INY Sbjct: 583 HEVKINY 589>XP_005250951 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H V+INY Sbjct: 625 HEVKINY 631>NP_861452 Length = 723 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H V+INY Sbjct: 688 HEVKINY 694>NP_057006 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 119 RVNYIG 124>NP_002438 Length = 1400 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H+++ Y+G Sbjct: 878 HAIKFEYIG 886>NP_001123237 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 119 RVNYIG 124>NP_694984 Length = 1802 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H +RI Y+G Sbjct: 340 HVIRIYYLG 348>XP_006724887 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 119 RVNYIG 124>XP_005262172 Length = 1631 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H +RI Y+G Sbjct: 169 HVIRIYYLG 177>XP_005262170 Length = 1752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H +RI Y+G Sbjct: 340 HVIRIYYLG 348>XP_005265227 Length = 1401 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H+++ Y+G Sbjct: 879 HAIKFEYIG 887>NP_002221 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>NP_068831 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>NP_689758 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 220 RLNYIG 225>NP_003540 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HSVRINYVG 9 HS+ NY G Sbjct: 210 HSMASNYTG 218>NP_001186958 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HSVRINYVG 9 HS+ NY G Sbjct: 210 HSMASNYTG 218>NP_001186959 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HSVRINYVG 9 HS+ NY G Sbjct: 210 HSMASNYTG 218>XP_006721941 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>XP_006721940 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>XP_006721939 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>XP_006721938 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>XP_006721937 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>XP_006721936 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 474 NSVRLNY 480>XP_006721935 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 491 NSVRLNY 497>XP_006721934 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 512 NSVRLNY 518>XP_005257370 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSVRINY 7 +SVR+NY Sbjct: 512 NSVRLNY 518>XP_005262834 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 178 RLNYIG 183>XP_006714175 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 179 RLNYIG 184>XP_005262833 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RINYVG 9 R+NY+G Sbjct: 219 RLNYIG 224>NP_776159 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HSVRINYVG 9 H++R +Y G Sbjct: 343 HTIRCSYCG 351>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>NP_073153 Length = 1944 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 1045 HPVRVNVV 1052>NP_001121182 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H++RI Y Sbjct: 1180 HTIRIQY 1186>NP_001121181 Length = 1311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H++RI Y Sbjct: 1221 HTIRIQY 1227>NP_001121180 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H++RI Y Sbjct: 1273 HTIRIQY 1279>NP_005798 Length = 1404 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H++RI Y Sbjct: 1314 HTIRIQY 1320>XP_006726447 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 30 HPVRVNVV 37>XP_005276263 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 30 HPVRVNVV 37>XP_006726445 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 308 HPVRVNVV 315>XP_006712754 Length = 1784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 885 HPVRVNVV 892>XP_006712753 Length = 1846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 947 HPVRVNVV 954>XP_005264736 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 333 HPVRVNVV 340>XP_006712220 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSVRINYV 8 H VR+N V Sbjct: 308 HPVRVNVV 315>XP_005244879 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H++RI Y Sbjct: 1271 HTIRIQY 1277>XP_006711171 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HSVRINY 7 H++RI Y Sbjct: 1291 HTIRIQY 1297>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVRINYVG 9 +VR+NY G Sbjct: 1872 NVRMNYSG 1879Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.142 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 456,745 Number of extensions: 974 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |