Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001129941 18 1935 NP_076432 18 1935 XP_005247785 18 1935 XP_005247784 18 1935 XP_005247783 18 1935 XP_005247782 18 1935 XP_006717092 17 3301 XP_006717091 17 3301 XP_006717090 17 3301 NP_065128 16 5631 NP_001135943 16 5631 XP_005263206 16 5631 XP_005263205 16 5631 NP_009054 16 7355 NP_996816 16 7355 NP_001277114 16 7355 NP_068375 16 7355 NP_003728 16 7355 NP_038478 16 7355 NP_849188 16 7355 NP_001276904 16 7355 XP_005253264 16 7355 XP_006712537 16 7355 XP_005246557 16 7355 XP_006712535 16 7355 XP_006712532 16 7355 XP_006712531 16 7355 XP_006712530 16 7355 XP_006712529 16 7355 XP_006712528 16 7355 XP_006712527 16 7355 XP_005246549 16 7355 XP_006712526 16 7355 XP_006712525 16 7355 XP_005246546 16 7355 XP_006712524 16 7355 XP_005246545 16 7355 NP_000490 15 9605 NP_663160 15 9605 NP_663162 15 9605 NP_056365 15 9605 NP_663161 15 9605 NP_689842 15 9605 NP_597722 15 9605 NP_001273967 15 9605 NP_001273965 15 9605 NP_004237 15 9605 NP_001035878 15 9605 XP_006723847 15 9605 XP_005254242 15 9605 XP_006717041 15 9605 XP_006716794 15 9605 XP_005251446 15 9605 XP_005251445 15 9605 XP_005251444 15 9605 XP_005251443 15 9605 XP_006715746 15 9605 XP_006715745 15 9605 XP_006715744 15 9605 XP_005249755 15 9605 NP_003774 15 9605 NP_004966 15 9605>NP_001129941 Length = 575 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HSSTR+ SV Sbjct: 55 HSSTRHTSV 63>NP_076432 Length = 575 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HSSTR+ SV Sbjct: 55 HSSTRHTSV 63>XP_005247785 Length = 488 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HSSTR+ SV Sbjct: 55 HSSTRHTSV 63>XP_005247784 Length = 569 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HSSTR+ SV Sbjct: 49 HSSTRHTSV 57>XP_005247783 Length = 575 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HSSTR+ SV Sbjct: 55 HSSTRHTSV 63>XP_005247782 Length = 575 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HSSTR+ SV Sbjct: 55 HSSTRHTSV 63>XP_006717092 Length = 672 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSTRNL 7 HSS+RNL Sbjct: 22 HSSSRNL 28>XP_006717091 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSTRNL 7 HSS+RNL Sbjct: 22 HSSSRNL 28>XP_006717090 Length = 737 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSTRNL 7 HSS+RNL Sbjct: 22 HSSSRNL 28>NP_065128 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTRNLSV 9 SST+N+S+ Sbjct: 60 SSTKNISI 67>NP_001135943 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTRNLSV 9 SST+N+S+ Sbjct: 60 SSTKNISI 67>XP_005263206 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTRNLSV 9 SST+N+S+ Sbjct: 60 SSTKNISI 67>XP_005263205 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTRNLSV 9 SST+N+S+ Sbjct: 60 SSTKNISI 67>NP_009054 Length = 1546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 H STR+++V Sbjct: 1131 HGSTRSVAV 1139>NP_996816 Length = 5202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 H STR+++V Sbjct: 1131 HGSTRSVAV 1139>NP_001277114 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 H+ST LSV Sbjct: 752 HNSTATLSV 760>NP_068375 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 H+ST LSV Sbjct: 762 HNSTATLSV 770>NP_003728 Length = 3298 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HSST LSV Sbjct: 1595 HSSTGALSV 1603>NP_038478 Length = 2168 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>NP_849188 Length = 2400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 H +TRNL+ Sbjct: 172 HRNTRNLA 179>NP_001276904 Length = 2132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 687 HSTPRNLHI 695>XP_005253264 Length = 3443 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HSST LSV Sbjct: 1740 HSSTGALSV 1748>XP_006712537 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_005246557 Length = 2095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 570 HSTPRNLHI 578>XP_006712535 Length = 2095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 570 HSTPRNLHI 578>XP_006712532 Length = 2141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 687 HSTPRNLHI 695>XP_006712531 Length = 2169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_006712530 Length = 2176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 687 HSTPRNLHI 695>XP_006712529 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_006712528 Length = 2180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_006712527 Length = 2203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_005246549 Length = 2212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 687 HSTPRNLHI 695>XP_006712526 Length = 2212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 687 HSTPRNLHI 695>XP_006712525 Length = 2212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_005246546 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_006712524 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>XP_005246545 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HS+ RNL + Sbjct: 689 HSTPRNLHI 697>NP_000490 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HS+TR+ S+ Sbjct: 388 HSTTRDTSL 396>NP_663160 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 271 HSSNPNLS 278>NP_663162 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 271 HSSNPNLS 278>NP_056365 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 302 HSSNPNLS 309>NP_663161 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 302 HSSNPNLS 309>NP_689842 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 133 HSSTRSHS 140>NP_597722 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 H+S+ NLS Sbjct: 6 HTSSENLS 13>NP_001273967 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 H+S+ NLS Sbjct: 6 HTSSENLS 13>NP_001273965 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 H+S+ NLS Sbjct: 6 HTSSENLS 13>NP_004237 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 HSS N+SV Sbjct: 108 HSSPGNVSV 116>NP_001035878 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 288 HSSTRSHS 295>XP_006723847 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 H STR+ S+ Sbjct: 850 HGSTRDQSI 858>XP_005254242 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSTRNLSV 9 HS+TR+ S+ Sbjct: 388 HSTTRDTSL 396>XP_006717041 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 H+S+ NLS Sbjct: 6 HTSSENLS 13>XP_006716794 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 288 HSSTRSHS 295>XP_005251446 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 288 HSSTRSHS 295>XP_005251445 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 66 HSSTRSHS 73>XP_005251444 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 66 HSSTRSHS 73>XP_005251443 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HSSTRNLS 8 HSSTR+ S Sbjct: 133 HSSTRSHS 140>XP_006715746 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 271 HSSNPNLS 278>XP_006715745 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 302 HSSNPNLS 309>XP_006715744 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 271 HSSNPNLS 278>XP_005249755 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSTRNLS 8 HSS NLS Sbjct: 302 HSSNPNLS 309>NP_003774 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HSSTRNL 7 HSS RN+ Sbjct: 76 HSSLRNI 82>NP_004966 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSTRNLSV 9 H STR+ S+ Sbjct: 850 HGSTRDQSI 858Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.108 0.274 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,634 Number of extensions: 688 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |