Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 869 NP_004561 19 869 XP_005253450 19 869 XP_006719151 19 869 NP_002102 17 2528 NP_000005 17 4312 XP_006719119 17 4312 NP_064532 16 7355 NP_787036 16 7355 NP_787034 16 7355 NP_787033 16 7355 NP_001032895 16 7355 NP_001257620 16 7355 XP_006723641 16 7355 XP_005269107 16 7355 XP_006719588 16 7355 XP_006719587 16 7355 XP_005264049 16 7355 XP_006712694 16 7355 XP_006712693 16 7355 XP_005264045 16 7355 XP_005264042 16 7355 XP_005264038 16 7355 XP_006712692 16 7355 XP_005264037 16 7355 NP_001257903 15 9605 NP_659403 15 9605 NP_001171175 15 9605 NP_757345 15 9605 NP_003181 15 9605 NP_757346 15 9605 NP_002925 15 9605 NP_057636 15 9605 NP_001073986 15 9605 NP_001269700 15 9605 NP_002855 15 9605 NP_001072 15 9605 XP_006721269 15 9605 XP_006716792 15 9605 XP_005251441 15 9605 XP_005251440 15 9605 XP_006716788 15 9605 XP_006716787 15 9605 XP_006716786 15 9605 XP_005251439 15 9605 XP_005265364 15 9605 XP_006713308 15 9605 XP_006713307 15 9605 XP_006713306 15 9605 XP_005265360 15 9605 XP_006713305 15 9605 XP_005265358 15 9605 XP_006713304 15 9605 XP_006713303 15 9605 XP_005265356 15 9605 XP_006713302 15 9605 XP_006713301 15 9605 XP_006713300 15 9605 XP_006713299 15 9605 XP_006713298 15 9605 XP_006712630 15 9605>NP_001275701 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HSSSQVSL 8 HSSSQVSL Sbjct: 31 HSSSQVSL 38>NP_004561 Length = 1445 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HSSSQVSL 8 HSSSQVSL Sbjct: 31 HSSSQVSL 38>XP_005253450 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HSSSQVSL 8 HSSSQVSL Sbjct: 31 HSSSQVSL 38>XP_006719151 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HSSSQVSL 8 HSSSQVSL Sbjct: 31 HSSSQVSL 38>NP_002102 Length = 3144 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 HSSSQVS 7 HSSSQVS Sbjct: 534 HSSSQVS 540>NP_000005 Length = 1474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HSSSQVSLS 9 H+S Q+SLS Sbjct: 1358 HTSFQISLS 1366>XP_006719119 Length = 1512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HSSSQVSLS 9 H+S Q+SLS Sbjct: 1358 HTSFQISLS 1366>NP_064532 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSSQVSL 8 H S+Q+SL Sbjct: 177 HKSTQISL 184>NP_787036 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HS +VSLS Sbjct: 212 HSMDEVSLS 220>NP_787034 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HS +VSLS Sbjct: 212 HSMDEVSLS 220>NP_787033 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HS +VSLS Sbjct: 212 HSMDEVSLS 220>NP_001032895 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HSSSQV 6 HSSSQV Sbjct: 425 HSSSQV 430>NP_001257620 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HS +VSLS Sbjct: 212 HSMDEVSLS 220>XP_006723641 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HS +VSLS Sbjct: 212 HSMDEVSLS 220>XP_005269107 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HSSSQV 6 HSSSQV Sbjct: 425 HSSSQV 430>XP_006719588 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HSSSQV 6 HSSSQV Sbjct: 425 HSSSQV 430>XP_006719587 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HSSSQV 6 HSSSQV Sbjct: 425 HSSSQV 430>XP_005264049 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 689 SSSQVSL 695>XP_006712694 Length = 805 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 782 SSSQVSL 788>XP_006712693 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 808 SSSQVSL 814>XP_005264045 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 808 SSSQVSL 814>XP_005264042 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 869 SSSQVSL 875>XP_005264038 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 895 SSSQVSL 901>XP_006712692 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 895 SSSQVSL 901>XP_005264037 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SSSQVSL 8 SSSQVSL Sbjct: 895 SSSQVSL 901>NP_001257903 Length = 5121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HSS Q+S + Sbjct: 1342 HSSHQISFT 1350>NP_659403 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 1634 HSPSQVGL 1641>NP_001171175 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 170 HSPSQVGL 177>NP_757345 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSSQVSLS 9 HS VSLS Sbjct: 355 HSDGSVSLS 363>NP_003181 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSSQVSLS 9 HS VSLS Sbjct: 355 HSDGSVSLS 363>NP_757346 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSSQVSLS 9 HS VSLS Sbjct: 268 HSDGSVSLS 276>NP_002925 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 100 HSGSQVPL 107>NP_057636 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSSQVSLS 9 HS +++SLS Sbjct: 127 HSPARISLS 135>NP_001073986 Length = 1442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1287 HGSSESSLS 1295>NP_001269700 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSSQVSLS 9 HS +++SLS Sbjct: 216 HSPARISLS 224>NP_002855 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSSQVSLS 9 H+S Q+SL+ Sbjct: 1364 HTSFQISLT 1372>NP_001072 Length = 3623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HSSSQVS 7 HS SQ+S Sbjct: 685 HSDSQIS 691>XP_006721269 Length = 5138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 HSS Q+S + Sbjct: 1359 HSSHQISFT 1367>XP_006716792 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 170 HSPSQVGL 177>XP_005251441 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 170 HSPSQVGL 177>XP_005251440 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 171 HSPSQVGL 178>XP_006716788 Length = 1842 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 1634 HSPSQVGL 1641>XP_006716787 Length = 1864 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 1634 HSPSQVGL 1641>XP_006716786 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 1634 HSPSQVGL 1641>XP_005251439 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HSSSQVSL 8 HS SQV L Sbjct: 1634 HSPSQVGL 1641>XP_005265364 Length = 1344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1189 HGSSESSLS 1197>XP_006713308 Length = 1351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1196 HGSSESSLS 1204>XP_006713307 Length = 1351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1196 HGSSESSLS 1204>XP_006713306 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1209 HGSSESSLS 1217>XP_005265360 Length = 1442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1287 HGSSESSLS 1295>XP_006713305 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1301 HGSSESSLS 1309>XP_005265358 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1306 HGSSESSLS 1314>XP_006713304 Length = 1468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1313 HGSSESSLS 1321>XP_006713303 Length = 1475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1320 HGSSESSLS 1328>XP_005265356 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1326 HGSSESSLS 1334>XP_006713302 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1339 HGSSESSLS 1347>XP_006713301 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1339 HGSSESSLS 1347>XP_006713300 Length = 1500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1345 HGSSESSLS 1353>XP_006713299 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1346 HGSSESSLS 1354>XP_006713298 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSSQVSLS 9 H SS+ SLS Sbjct: 1346 HGSSESSLS 1354>XP_006712630 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HSSSQVSLS 9 HS +++SLS Sbjct: 127 HSPARISLS 135Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.285 0.0922 0.202 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 338,283 Number of extensions: 699 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |