Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 21 229 NP_444254 21 229 NP_444253 21 229 NP_444255 21 229 XP_005247551 21 229 XP_005247550 21 229 XP_006713712 21 229 XP_005247549 21 229 NP_689763 17 2528 NP_001188358 17 2528 NP_036427 17 2528 NP_001186210 17 2528 XP_006724247 17 2528 XP_006724246 17 2528 XP_006724245 17 2528 XP_006724244 17 2528 XP_006724243 17 2528 XP_005261477 17 2528 XP_005261476 17 2528 XP_005261474 17 2528 XP_006724242 17 2528 XP_005261473 17 2528 XP_005261472 17 2528 XP_006714820 17 2528 XP_005268437 17 2528 NP_005969 17 3301 NP_443137 17 4312 NP_001129243 17 4312 NP_002942 17 4312 XP_006723915 17 4312 XP_006723914 17 4312 XP_005260548 17 4312 XP_006723913 17 4312 XP_006723912 17 4312 XP_006712292 17 4312 XP_005246323 17 4312 XP_005246322 17 4312 XP_006712291 17 4312 XP_005246320 17 4312 NP_001360 16 5631 XP_005248319 16 5631 NP_001136007 16 5631 NP_064615 16 7355 NP_057217 16 7355 NP_001185619 16 7355 NP_001035754 16 7355 NP_001138482 16 7355 XP_005258567 16 7355 XP_005263747 16 7355 NP_789780 16 7355 NP_060619 15 9605 NP_059142 15 9605 NP_060734 15 9605 NP_057287 15 9605 NP_690621 15 9605 NP_690620 15 9605 NP_690619 15 9605 NP_001035723 15 9605 NP_002812 15 9605 NP_001257327 15 9605 XP_006724089 15 9605 XP_005250062 15 9605 XP_005250061 15 9605 XP_006716084 15 9605 XP_005250060 15 9605 XP_005250059 15 9605 NP_542984 15 9605>NP_444256 Length = 1794 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 877 HSPQQVDFR 885>NP_444254 Length = 1845 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 877 HSPQQVDFR 885>NP_444253 Length = 1914 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 946 HSPQQVDFR 954>NP_444255 Length = 1863 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 946 HSPQQVDFR 954>XP_005247551 Length = 1855 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 887 HSPQQVDFR 895>XP_005247550 Length = 1856 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 956 HSPQQVDFR 964>XP_006713712 Length = 1923 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 956 HSPQQVDFR 964>XP_005247549 Length = 1924 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 HS QQVDFR Sbjct: 956 HSPQQVDFR 964>NP_689763 Length = 729 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 HS QQ D R Sbjct: 696 HSGQQTDLR 704>NP_001188358 Length = 2170 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 916 HSAQQVD 922>NP_036427 Length = 2220 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>NP_001186210 Length = 2220 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724247 Length = 1189 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724246 Length = 2103 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724245 Length = 2191 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724244 Length = 2191 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724243 Length = 2196 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261477 Length = 2200 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261476 Length = 2210 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 921 HSAQQVD 927>XP_005261474 Length = 2225 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724242 Length = 2226 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261473 Length = 2250 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261472 Length = 2255 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006714820 Length = 729 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 HS QQ D R Sbjct: 696 HSGQQTDLR 704>XP_005268437 Length = 735 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 HS QQ D R Sbjct: 702 HSGQQTDLR 710>NP_005969 Length = 97 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HSSQQVDFR 9 +S QQVDF+ Sbjct: 65 NSDQQVDFQ 73>NP_443137 Length = 1092 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQQVDFR 9 SQQ DFR Sbjct: 9 SQQTDFR 15>NP_001129243 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 138 HLSQQADLR 146>NP_002942 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 170 HLSQQADLR 178>XP_006723915 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 186 HLSQQADLR 194>XP_006723914 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 186 HLSQQADLR 194>XP_005260548 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 170 HLSQQADLR 178>XP_006723913 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 186 HLSQQADLR 194>XP_006723912 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H SQQ D R Sbjct: 186 HLSQQADLR 194>XP_006712292 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQQVDFR 9 SQQ DFR Sbjct: 9 SQQTDFR 15>XP_005246323 Length = 1069 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQQVDFR 9 SQQ DFR Sbjct: 9 SQQTDFR 15>XP_005246322 Length = 1084 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQQVDFR 9 SQQ DFR Sbjct: 9 SQQTDFR 15>XP_006712291 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQQVDFR 9 SQQ DFR Sbjct: 9 SQQTDFR 15>XP_005246320 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQQVDFR 9 SQQ DFR Sbjct: 9 SQQTDFR 15>NP_001360 Length = 4624 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSQQVDFR 9 HSS ++FR Sbjct: 986 HSSHTINFR 994>XP_005248319 Length = 4609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HSSQQVDFR 9 HSS ++FR Sbjct: 971 HSSHTINFR 979>NP_001136007 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HSSQQVDFR 9 HS QVDF+ Sbjct: 74 HSRFQVDFQ 82>NP_064615 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SQQVDFR 9 SQ++DFR Sbjct: 189 SQELDFR 195>NP_057217 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSQQVDF 8 H+S +VDF Sbjct: 120 HASAKVDF 127>NP_001185619 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SQQVDFR 9 SQ++DFR Sbjct: 189 SQELDFR 195>NP_001035754 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SQQVDFR 9 SQ++DFR Sbjct: 189 SQELDFR 195>NP_001138482 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS+++D Sbjct: 245 HSSEEID 251>XP_005258567 Length = 1036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSSQQVDF 8 H SQ+ DF Sbjct: 643 HESQEEDF 650>XP_005263747 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HSSQQVDF 8 H+S +VDF Sbjct: 12 HASAKVDF 19>NP_789780 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSSQQVDF 8 H SQ+ DF Sbjct: 643 HESQEEDF 650>NP_060619 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSSQQVDF 8 HS QQ+ F Sbjct: 385 HSRQQLSF 392>NP_059142 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSSQQVDF 8 HS +VDF Sbjct: 232 HSKYKVDF 239>NP_060734 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HSSQQVDFR 9 H S + DFR Sbjct: 222 HGSIEADFR 230>NP_057287 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 58 HSSRKVD 64>NP_690621 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QQVDFR 9 QQ+DFR Sbjct: 783 QQLDFR 788>NP_690620 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QQVDFR 9 QQ+DFR Sbjct: 709 QQLDFR 714>NP_690619 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QQVDFR 9 QQ+DFR Sbjct: 799 QQLDFR 804>NP_001035723 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 14 HSSRKVD 20>NP_002812 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QQVDFR 9 QQ+DFR Sbjct: 839 QQLDFR 844>NP_001257327 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QQVDFR 9 QQ+DFR Sbjct: 847 QQLDFR 852>XP_006724089 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSSQQVDF 8 HS +VDF Sbjct: 232 HSKYKVDF 239>XP_005250062 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 58 HSSRKVD 64>XP_005250061 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 14 HSSRKVD 20>XP_006716084 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 54 HSSRKVD 60>XP_005250060 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 58 HSSRKVD 64>XP_005250059 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HSSQQVD 7 HSS++VD Sbjct: 58 HSSRKVD 64>NP_542984 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HSSQQVDF 8 HS +VDF Sbjct: 232 HSKYKVDF 239Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.124 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 491,546 Number of extensions: 874 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |