Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_005105 17 4312 XP_005248278 17 4312 NP_612422 16 5631 NP_112506 16 7355 NP_006453 16 7355 NP_002010 16 7355 NP_001153392 16 7355 NP_001153502 16 7355 NP_835226 16 7355 NP_659429 16 7355 NP_001268379 16 7355 NP_001268380 16 7355 XP_005260706 16 7355 XP_005260703 16 7355 XP_005260702 16 7355 XP_006712420 16 7355 XP_006712419 16 7355 XP_005263954 16 7355 NP_001027466 15 9605 NP_000053 15 9605 NP_001186738 15 9605 NP_001186740 15 9605 NP_056249 15 9605 NP_001186741 15 9605 NP_055426 15 9605 NP_945345 15 9605 NP_005388 15 9605 NP_001018121 15 9605 NP_003418 15 9605 NP_060063 15 9605 NP_942595 15 9605 XP_006726599 15 9605 XP_006719013 15 9605 XP_005249698 15 9605 XP_006715468 15 9605 XP_005248756 15 9605 XP_006715467 15 9605 XP_005249427 15 9605 XP_005249426 15 9605 XP_005249421 15 9605 XP_005263174 15 9605 XP_001715329 15 9605 NP_001129396 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 116 QVTVELTV 123>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 116 QVTVELTV 123>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 116 QVTVELTV 123>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 116 QVTVELTV 123>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 126 QVTVELTV 133>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 126 QVTVELTV 133>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 126 QVTVELTV 133>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 QVTVELTV Sbjct: 126 QVTVELTV 133>NP_005105 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HQVTVELT 8 HQ+TVE T Sbjct: 113 HQLTVEKT 120>XP_005248278 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HQVTVELT 8 HQ+TVE T Sbjct: 113 HQLTVEKT 120>NP_612422 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVTVELTV 9 Q TVE+TV Sbjct: 116 QATVEMTV 123>NP_112506 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H VT+ LTV Sbjct: 67 HTVTIWLTV 75>NP_006453 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H VT+ LTV Sbjct: 25 HTVTIWLTV 33>NP_002010 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +T+ LT+ Sbjct: 615 HSITLNLTI 623>NP_001153392 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +T+ LT+ Sbjct: 615 HSITLNLTI 623>NP_001153502 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +T+ LT+ Sbjct: 615 HSITLNLTI 623>NP_835226 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 HQ ++LTV Sbjct: 273 HQADIKLTV 281>NP_659429 Length = 1294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 ++TVELTV Sbjct: 210 KLTVELTV 217>NP_001268379 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 HQ ++LTV Sbjct: 272 HQADIKLTV 280>NP_001268380 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 HQ ++LTV Sbjct: 273 HQADIKLTV 281>XP_005260706 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H VT+ LTV Sbjct: 84 HTVTIWLTV 92>XP_005260703 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H VT+ LTV Sbjct: 84 HTVTIWLTV 92>XP_005260702 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H VT+ LTV Sbjct: 84 HTVTIWLTV 92>XP_006712420 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 ++TVELTV Sbjct: 60 KLTVELTV 67>XP_006712419 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 ++TVELTV Sbjct: 210 KLTVELTV 217>XP_005263954 Length = 1312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 ++TVELTV Sbjct: 210 KLTVELTV 217>NP_001027466 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HQVTVELT 8 HQ +ELT Sbjct: 443 HQTVLELT 450>NP_000053 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HQVTVELT 8 HQ +ELT Sbjct: 443 HQTVLELT 450>NP_001186738 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +TVE +V Sbjct: 853 HNITVESSV 861>NP_001186740 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +TVE +V Sbjct: 888 HNITVESSV 896>NP_056249 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +TVE +V Sbjct: 902 HNITVESSV 910>NP_001186741 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HQVTVELTV 9 H +TVE +V Sbjct: 882 HNITVESSV 890>NP_055426 Length = 5596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 H+VTVE Sbjct: 1929 HEVTVE 1934>NP_945345 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTVELTV 9 VTVE+TV Sbjct: 622 VTVEVTV 628>NP_005388 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HQVTVELT 8 H VT +LT Sbjct: 164 HSVTTDLT 171>NP_001018121 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HQVTVELT 8 H VT +LT Sbjct: 164 HSVTTDLT 171>NP_003418 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVTV+ Sbjct: 45 HQVTVQ 50>NP_060063 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVT+E Sbjct: 49 HQVTLE 54>NP_942595 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVT+E Sbjct: 49 HQVTLE 54>XP_006726599 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QVTVELTV 9 Q TV+LT+ Sbjct: 481 QTTVQLTI 488>XP_006719013 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QVTVELTV 9 Q TV+LT+ Sbjct: 426 QTTVQLTI 433>XP_005249698 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 +VT+E+TV Sbjct: 625 RVTIEVTV 632>XP_006715468 Length = 3744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 H+VTVE Sbjct: 77 HEVTVE 82>XP_005248756 Length = 3905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 H+VTVE Sbjct: 238 HEVTVE 243>XP_006715467 Length = 5550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 H+VTVE Sbjct: 1929 HEVTVE 1934>XP_005249427 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVTV+ Sbjct: 45 HQVTVQ 50>XP_005249426 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVTV+ Sbjct: 45 HQVTVQ 50>XP_005249421 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVTV+ Sbjct: 45 HQVTVQ 50>XP_005263174 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HQVTVE 6 HQVT+E Sbjct: 49 HQVTLE 54>XP_001715329 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QVTVELTV 9 Q TV+LT+ Sbjct: 426 QTTVQLTI 433>NP_001129396 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTVELTV 9 +VT+E+TV Sbjct: 1171 RVTIEVTV 1178Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.126 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 378,615 Number of extensions: 737 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |