Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_058640 17 3301 NP_001243197 17 3301 NP_001243196 17 3301 NP_115967 17 3301 NP_003836 17 3301 XP_006718107 17 3301 XP_006718106 17 3301 NP_689475 17 4312 NP_443188 17 4312 XP_006722996 17 4312 XP_005260201 17 4312 XP_005260199 17 4312 XP_006721080 17 4312 XP_006721079 17 4312 XP_005255141 17 4312 NP_078832 16 5631 NP_006725 16 5631 XP_005271723 16 5631 XP_005271722 16 5631 XP_005269873 16 5631 XP_005267014 16 5631 NP_852004 16 7355 NP_001193795 16 7355 NP_000556 16 7355 NP_940905 16 7355 NP_001274748 16 7355 NP_001274749 16 7355 NP_001103132 16 7355 NP_612364 16 7355 NP_001269618 16 7355 NP_001138495 16 7355 NP_076982 16 7355 NP_001740 16 7355 NP_001269619 16 7355 NP_001269617 16 7355 XP_005259354 16 7355 XP_005259353 16 7355 XP_005259352 16 7355 XP_005257833 16 7355 XP_006722227 16 7355 XP_005252259 16 7355 XP_006717345 16 7355 XP_005252255 16 7355 XP_005252253 16 7355 XP_005252252 16 7355 XP_005252250 16 7355 XP_005245197 16 7355 XP_005245196 16 7355 XP_006711362 16 7355 XP_006711361 16 7355 XP_006711360 16 7355 XP_006711359 16 7355 XP_006711358 16 7355 XP_006711357 16 7355 NP_037505 16 7355 NP_001003962 16 7355 NP_001004737 16 7355 NP_001004736 16 7355 NP_001005516 16 7355 NP_066270 15 9605 NP_055523 15 9605 NP_001015001 15 9605 NP_001816 15 9605 NP_689689 15 9605 NP_055318 15 9605 XP_006719769 15 9605 XP_006719406 15 9605 XP_005248477 15 9605 XP_006712789 15 9605 XP_005270533 15 9605 NP_001021100 15 9605 NP_997204 15 9605 NP_001093206 15 9605 NP_001093205 15 9605>NP_058640 Length = 299 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HPSLKTKA 8 HP LKT A Sbjct: 284 HPKLKTTA 291>NP_001243197 Length = 1026 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HPSLKTKA 8 HPS++TK+ Sbjct: 473 HPSVQTKS 480>NP_001243196 Length = 1320 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HPSLKTKA 8 HPS++TK+ Sbjct: 767 HPSVQTKS 774>NP_115967 Length = 1320 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HPSLKTKA 8 HPS++TK+ Sbjct: 767 HPSVQTKS 774>NP_003836 Length = 520 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HPSLKTK 7 HPS+KT+ Sbjct: 14 HPSIKTQ 20>XP_006718107 Length = 1330 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HPSLKTKA 8 HPS++TK+ Sbjct: 777 HPSVQTKS 784>XP_006718106 Length = 1338 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HPSLKTKA 8 HPS++TK+ Sbjct: 785 HPSVQTKS 792>NP_689475 Length = 499 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HPSLKTK 7 HPSL+T+ Sbjct: 170 HPSLRTQ 176>NP_443188 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSLKTK + Sbjct: 180 PSLKTKLL 187>XP_006722996 Length = 404 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HPSLKTK 7 HPSL+T+ Sbjct: 175 HPSLRTQ 181>XP_005260201 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HPSLKTK 7 HPSL+T+ Sbjct: 175 HPSLRTQ 181>XP_005260199 Length = 504 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HPSLKTK 7 HPSL+T+ Sbjct: 175 HPSLRTQ 181>XP_006721080 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSLKTK + Sbjct: 180 PSLKTKLL 187>XP_006721079 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSLKTK + Sbjct: 180 PSLKTKLL 187>XP_005255141 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSLKTK + Sbjct: 180 PSLKTKLL 187>NP_078832 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PSLKTK 7 PSLKTK Sbjct: 33 PSLKTK 38>NP_006725 Length = 2446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 +PSL TKA Sbjct: 352 NPSLNTKA 359>XP_005271723 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PSLKTK 7 PSLKTK Sbjct: 33 PSLKTK 38>XP_005271722 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PSLKTK 7 PSLKTK Sbjct: 33 PSLKTK 38>XP_005269873 Length = 129 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HPSLKTKA 8 HP L+T A Sbjct: 117 HPGLRTNA 124>XP_005267014 Length = 2446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 +PSL TKA Sbjct: 352 NPSLNTKA 359>NP_852004 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>NP_001193795 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>NP_000556 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>NP_940905 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 1007 HPLLRRKSM 1015>NP_001274748 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 983 HPLLRRKSM 991>NP_001274749 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 940 HPLLRRKSM 948>NP_001103132 Length = 4284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP KTK + Sbjct: 1328 HPLAKTKTL 1336>NP_612364 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HPSLKTKA 8 HP L+T A Sbjct: 205 HPELRTHA 212>NP_001269618 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 286 HPTQKSKA 293>NP_001138495 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HPSLKTKA 8 HP L+T A Sbjct: 205 HPELRTHA 212>NP_076982 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 359 HPTQKSKA 366>NP_001740 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 131 HPDLKT 136>NP_001269619 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 291 HPTQKSKA 298>NP_001269617 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 358 HPTQKSKA 365>XP_005259354 Length = 156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 19 HPDLKT 24>XP_005259353 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 131 HPDLKT 136>XP_005259352 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 131 HPDLKT 136>XP_005257833 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HPSLKTKA 8 HP L+T A Sbjct: 205 HPELRTHA 212>XP_006722227 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HPSLKTKA 8 HP L+T A Sbjct: 213 HPELRTHA 220>XP_005252259 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 60 HPTQKSKA 67>XP_006717345 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 286 HPTQKSKA 293>XP_005252255 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 291 HPTQKSKA 298>XP_005252253 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 320 HPTQKSKA 327>XP_005252252 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 321 HPTQKSKA 328>XP_005252250 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HPSLKTKA 8 HP+ K+KA Sbjct: 359 HPTQKSKA 366>XP_005245197 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>XP_005245196 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>XP_006711362 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>XP_006711361 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 PSL TKA+ Sbjct: 140 PSLTTKAV 147>XP_006711360 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 571 HPLLRRKSM 579>XP_006711359 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 624 HPLLRRKSM 632>XP_006711358 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 990 HPLLRRKSM 998>XP_006711357 Length = 1142 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP L+ K+M Sbjct: 1014 HPLLRRKSM 1022>NP_037505 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 711 HPQLKT 716>NP_001003962 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 131 HPDLKT 136>NP_001004737 Length = 316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 20 HPELKT 25>NP_001004736 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 20 HPELKT 25>NP_001005516 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 20 HPKLKT 25>NP_066270 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP +KT M Sbjct: 99 HPFIKTVGM 107>NP_055523 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP L KA+ Sbjct: 1491 HPKLLAKAL 1499>NP_001015001 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP +KT M Sbjct: 99 HPFIKTVGM 107>NP_001816 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP +KT M Sbjct: 100 HPFIKTVGM 108>NP_689689 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HPSLKT 6 HP LKT Sbjct: 226 HPCLKT 231>NP_055318 Length = 2785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PSLKTKA 8 PS++TKA Sbjct: 2146 PSIETKA 2152>XP_006719769 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP L KA+ Sbjct: 1491 HPKLLAKAL 1499>XP_006719406 Length = 2380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PSLKTKA 8 PS++TKA Sbjct: 2146 PSIETKA 2152>XP_005248477 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP +KT M Sbjct: 217 HPFIKTVGM 225>XP_006712789 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HPSLKTKAM 9 HP+L+T + Sbjct: 304 HPALRTPGL 312>XP_005270533 Length = 126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HPSLKTKAM 9 +P+LK KA+ Sbjct: 12 NPTLKDKAL 20>NP_001021100 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 PSLKTKA 8 PSL TKA Sbjct: 714 PSLHTKA 720>NP_997204 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSLKTKAM 9 P+LKTK + Sbjct: 180 PTLKTKLL 187>NP_001093206 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP +KT M Sbjct: 100 HPFIKTVGM 108>NP_001093205 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HPSLKTKAM 9 HP +KT M Sbjct: 100 HPFIKTVGM 108Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.116 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,335 Number of extensions: 1010 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |