Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 19 869 NP_055224 17 2528 NP_001020418 17 2528 XP_005273157 17 2528 XP_005273158 17 2528 XP_005273156 17 2528 XP_006716156 17 3301 XP_006716155 17 3301 NP_075051 17 3301 NP_004655 17 4312 NP_060832 17 4312 NP_001540 16 5631 NP_001276688 16 5631 NP_001276687 16 5631 NP_001026853 16 5631 NP_056051 16 5631 XP_006714218 16 5631 XP_006714217 16 5631 XP_006714216 16 5631 NP_001073883 16 7355 NP_006022 16 7355 XP_005261187 16 7355 XP_005261186 16 7355 XP_005261185 16 7355 XP_005261184 16 7355 XP_005261183 16 7355 XP_005261182 16 7355 XP_005261181 16 7355 XP_005267749 16 7355 XP_005267748 16 7355 NP_001538 16 7355 NP_001153648 15 9605 NP_001153647 15 9605 NP_005637 15 9605 NP_060587 15 9605 NP_065810 15 9605 XP_006720684 15 9605 XP_005273291 15 9605 NP_689808 15 9605>NP_004295 Length = 1620 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 HNEAA EIL Sbjct: 368 HNEAAREIL 376>NP_055224 Length = 589 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NEAAIEIL 9 NEAA+E+L Sbjct: 235 NEAALEVL 242>NP_001020418 Length = 325 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NEAAIEIL 9 NEAA+E+L Sbjct: 235 NEAALEVL 242>XP_005273157 Length = 497 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NEAAIEIL 9 NEAA+E+L Sbjct: 143 NEAALEVL 150>XP_005273158 Length = 497 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NEAAIEIL 9 NEAA+E+L Sbjct: 143 NEAALEVL 150>XP_005273156 Length = 589 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NEAAIEIL 9 NEAA+E+L Sbjct: 235 NEAALEVL 242>XP_006716156 Length = 651 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+ IL Sbjct: 416 YNEAAVSIL 424>XP_006716155 Length = 654 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+ IL Sbjct: 89 YNEAAVSIL 97>NP_075051 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+ IL Sbjct: 232 YNEAAVSIL 240>NP_004655 Length = 233 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H+E A+E+L Sbjct: 167 HHEKAVELL 175>NP_060832 Length = 197 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H+E A+E+L Sbjct: 152 HHEKAVELL 160>NP_001540 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+E L Sbjct: 66 NNEAALECL 74>NP_001276688 Length = 438 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+E L Sbjct: 14 NNEAALECL 22>NP_001276687 Length = 438 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+E L Sbjct: 14 NNEAALECL 22>NP_001026853 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 +NEAA+E L Sbjct: 66 NNEAALECL 74>NP_056051 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HNEAAIE 7 HNE A+E Sbjct: 1250 HNETALE 1256>XP_006714218 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HNEAAIE 7 HNE A+E Sbjct: 627 HNETALE 633>XP_006714217 Length = 1013 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HNEAAIE 7 HNE A+E Sbjct: 794 HNETALE 800>XP_006714216 Length = 1026 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HNEAAIE 7 HNE A+E Sbjct: 807 HNETALE 813>NP_001073883 Length = 2028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNEAAIEIL 9 H EA +E+L Sbjct: 1045 HKEATMELL 1053>NP_006022 Length = 3336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 411 HHQAAIEKL 419>XP_005261187 Length = 2706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 411 HHQAAIEKL 419>XP_005261186 Length = 3139 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 293 HHQAAIEKL 301>XP_005261185 Length = 3229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 293 HHQAAIEKL 301>XP_005261184 Length = 3258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 411 HHQAAIEKL 419>XP_005261183 Length = 3268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 411 HHQAAIEKL 419>XP_005261182 Length = 3346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 411 HHQAAIEKL 419>XP_005261181 Length = 3347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HNEAAIEIL 9 H++AAIE L Sbjct: 411 HHQAAIEKL 419>XP_005267749 Length = 1055 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNEAAIEIL 9 H EA +E+L Sbjct: 72 HKEATMELL 80>XP_005267748 Length = 1535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNEAAIEIL 9 H EA +E+L Sbjct: 1045 HKEATMELL 1053>NP_001538 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NEAAIEIL 9 NEAA+E L Sbjct: 67 NEAALECL 74>NP_001153648 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HNEAAIE 7 H EAA+E Sbjct: 7 HKEAALE 13>NP_001153647 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HNEAAIE 7 H EAA+E Sbjct: 7 HKEAALE 13>NP_005637 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EAAIEIL 9 EAA+E+L Sbjct: 138 EAAVEVL 144>NP_060587 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HNEAAIE 7 HN+AA++ Sbjct: 22 HNKAAVD 28>NP_065810 Length = 4700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HNEAAIEI 8 H EA +EI Sbjct: 4347 HEEAKVEI 4354>XP_006720684 Length = 4713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HNEAAIEI 8 H EA +EI Sbjct: 4360 HEEAKVEI 4367>XP_005273291 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EAAIEIL 9 EAA+E+L Sbjct: 138 EAAVEVL 144>NP_689808 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HNEAAIEI 8 HN+ IE+ Sbjct: 400 HNDTVIEV 407Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.130 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,168 Number of extensions: 852 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |